RNA–Protein interactions for RNA: ENST00000493662.6

MSH5-SAPCD1-207, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MSH5-SAPCD1, Length 3,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-207ENST00000493662 PRICKLE3O43900 615 aaPredicted RBP9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 PSMA3P25788 255 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 CTXN1P60606 82 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 INSL4Q14641 139 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 PCGF3Q3KNV8 242 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 ACSM3Q53FZ2 586 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 SFRP5Q5T4F7 317 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 C1orf94Q6P1W5 598 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 TMEM200AQ86VY9 491 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 BVESQ8NE79 360 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 OR11H7Q8NGC8 314 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 C16orf52Q8NHV5 167 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 TSEN15Q8WW01 171 aaKnown RBP9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 DIO2Q92813 273 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 ADAD1Q96M93 576 aaKnown RBP9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 SCN8AQ9UQD0 1980 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 MEIKINA0A087WXM9 373 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 LGI1O95970 557 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 KLK3P07288 261 aaPredicted RBP9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 KCNJ3P48549 501 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 NRG3P56975 720 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 CRMP1Q14194 572 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 ST3GAL2Q16842 350 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 GLYR1Q49A26 553 aaPredicted RBP9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 AKR1C8PQ5T2L2 129 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 LANCL3Q6ZV70 420 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 BRIX1Q8TDN6 353 aaKnown RBP9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 CCDC74AQ96AQ1 378 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 EIF5A2Q9GZV4 153 aaKnown RBP9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 CTSFQ9UBX1 484 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 RARRES3Q9UL19 164 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 CBLCQ9ULV8 474 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 SLC22A7Q9Y694 548 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 LAMA1P25391 3075 aa9.84□□□□□ -0.83
MSH5-SAPCD1-207ENST00000493662 TNFRSF10CO14798 259 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CD63P08962 238 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CPEP16870 476 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ANXA7P20073 488 aaKnown RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PRPH2P23942 346 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TEAD1P28347 426 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 LEG1Q6P5S2 330 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 MARCH3Q86UD3 253 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OR5W2Q8NH69 310 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 MOAP1Q96BY2 351 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 NKX3-1Q99801 234 aaPredicted RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SMCO4Q9NRQ5 59 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 C20orf141Q9NUB4 165 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PLEKHB1Q9UF11 243 aaPredicted RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ING1Q9UK53 422 aaPredicted RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 FBXL4Q9UKA2 621 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 RPS10-NUDT3A0A1W2PQS6 291 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SLC22A23A1A5C7 686 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SEC14L5O43304 696 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 RPS10P46783 165 aaKnown RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SNRPGP62308 76 aaKnown RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 DMWDQ09019 674 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CCINQ13939 588 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SYT13Q7L8C5 426 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ACBD4Q8NC06 268 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 OR10R2Q8NGX6 335 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 AKR7LQ8NHP1 331 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ZNF582Q96NG8 517 aaPredicted RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 NMNAT3Q96T66 252 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 DEFB126Q9BYW3 111 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 POTEKPQ9BYX7 375 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SYT4Q9H2B2 425 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 BABAM2Q9NXR7 383 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ADAM29Q9UKF5 820 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 HS3ST3A1Q9Y663 406 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SNRNP200O75643 2136 aaKnown RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 DOCK7Q96N67 2140 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 A0A0D9SG52 128 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 PRAMEF25A6NGN4 478 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ZAR1LA6NP61 321 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 METTL12A8MUP2 240 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SHISA8B8ZZ34 492 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SIGLEC5O15389 551 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 HBQ1P09105 142 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 EMDP50402 254 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 MVDP53602 400 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SIGLEC14Q08ET2 396 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 GLT8D1Q68CQ7 371 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 VASNQ6EMK4 673 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 DGAT2L6Q6ZPD8 337 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CCDC71Q8IV32 467 aaPredicted RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 GID4Q8IVV7 300 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CDH26Q8IXH8 852 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 CA13Q8N1Q1 262 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ZNF676Q8N7Q3 588 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ZNF511Q8NB15 262 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ST7LQ8TDW4 575 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SIDT1Q9NXL6 827 aaKnown RBP9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 GRHPRQ9UBQ7 328 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 TANC1Q9C0D5 1861 aa9.83□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 FAM74A7A6NL05 159 aa9.82□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 ZNF593O00488 134 aaPredicted RBP9.82□□□□□ -0.84
MSH5-SAPCD1-207ENST00000493662 SCRG1O75711 98 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms