RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 C3orf49Q96BT1 292 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 HS6ST2Q96MM7 605 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 RBM4BQ9BQ04 359 aaKnown RBP6.12□□□□□ -1.43
TPR-208ENST00000492973 THAP7Q9BT49 309 aaPredicted RBP6.12□□□□□ -1.43
TPR-208ENST00000492973 RBM4Q9BWF3 364 aaKnown RBP6.12□□□□□ -1.43
TPR-208ENST00000492973 ANKRD19PQ9H560 264 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 PTGES2Q9H7Z7 377 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 DKKL1Q9UK85 242 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 SLC7A7Q9UM01 511 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 VDAC3Q9Y277 283 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 RPH3AQ9Y2J0 694 aaPredicted RBP6.12□□□□□ -1.43
TPR-208ENST00000492973 ZNF835Q9Y2P0 537 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 TENM4Q6N022 2769 aa6.12□□□□□ -1.43
TPR-208ENST00000492973 MED12Q93074 2177 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 SHANK1Q9Y566 2161 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 NINQ8N4C6 2090 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 GCN1Q92616 2671 aaKnown RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 A0A087WUJ7 227 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ARRDC5A6NEK1 342 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 AQP7P3A6NL99 342 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 NPIPA2E9PIF3 369 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 E9PQ18 207 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 NPIPA3F8WFD2 350 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 RGS10O43665 173 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 CHP2O43745 196 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 MITFO75030 526 aaPredicted RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 SNAP29O95721 258 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 PLA2G2AP14555 144 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 PGCP20142 388 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 GNLYP22749 145 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 SLC1A3P43003 542 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 OMPP47874 163 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 LHX2P50458 406 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 CCR4P51679 360 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ZNF41P51814 821 aaPredicted RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 UGT2B15P54855 530 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 CLDN15P56746 228 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 COPZ1P61923 177 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ADARB1P78563 741 aaKnown RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 PRKCDQ05655 676 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 CRYZQ08257 329 aaKnown RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 CBFBQ13951 182 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 C3AR1Q16581 482 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 FGD3Q5JSP0 725 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 RAET1LQ5VY80 246 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 PGBD2Q6P3X8 592 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ARHGAP11AQ6P4F7 1023 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 Q6ZPB1 254 aaPredicted RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 ZNF788Q6ZQV5 615 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 MBOAT2Q6ZWT7 520 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 CADM2Q8N3J6 435 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 OR4K5Q8NGD3 323 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 OR9Q2Q8NGE9 314 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 TMEM255BQ8WV15 326 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 DNAJA4Q8WW22 397 aaPredicted RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 ACOT11Q8WXI4 607 aaPredicted RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 DNAJC9Q8WXX5 260 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ABTB1Q969K4 478 aaPredicted RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 SDCCAG3Q96C92 435 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 WDYHV1Q96HA8 205 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 MPP4Q96JB8 637 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 SFXN2Q96NB2 322 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ZNF184Q99676 751 aaPredicted RBP6.11□□□□□ -1.43
TPR-208ENST00000492973 GPA33Q99795 319 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 NIPSNAP1Q9BPW8 284 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ZNF426Q9BUY5 554 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 DGCR6LQ9BY27 220 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 C12orf10Q9HB07 376 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 RPS6KB2Q9UBS0 482 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 MGAT4BQ9UQ53 548 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ZNF337Q9Y3M9 751 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 EXPH5Q8NEV8 1989 aa6.11□□□□□ -1.43
TPR-208ENST00000492973 ZNF407Q9C0G0 2248 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 KDM4EB2RXH2 506 aaPredicted RBP6.1□□□□□ -1.43
TPR-208ENST00000492973 H0YC42 278 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 DENRO43583 198 aaKnown RBP6.1□□□□□ -1.43
TPR-208ENST00000492973 OR10H3O60404 316 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 SLC19A2O60779 497 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 PTP4A3O75365 173 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 RBMXL2O75526 392 aaKnown RBP6.1□□□□□ -1.43
TPR-208ENST00000492973 NUDT14O95848 222 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 ACTL6AO96019 429 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 OPN1LWP04000 364 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 NPSP0C0P6 89 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 GP1BBP13224 206 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 POU2F1P14859 743 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 UQCRBP14927 111 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 ZNF708P17019 499 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 ZNF17P17021 662 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 CHMP24386 653 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 SHC1P29353 583 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 TACR3P29371 465 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 POLR2IP36954 125 aaKnown RBP6.1□□□□□ -1.43
TPR-208ENST00000492973 EIF1P41567 113 aaKnown RBP6.1□□□□□ -1.43
TPR-208ENST00000492973 RBM34P42696 430 aaKnown RBP6.1□□□□□ -1.43
TPR-208ENST00000492973 GSSP48637 474 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 TPD52P55327 224 aaPredicted RBP6.1□□□□□ -1.43
TPR-208ENST00000492973 CLDN18P56856 261 aa6.1□□□□□ -1.43
TPR-208ENST00000492973 CLDN20P56880 219 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms