RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ZNF705EA8MWA4 302 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SULT1B1O43704 296 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SLC16A7O60669 478 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 NTN1O95631 604 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 LGI1O95970 557 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 RECKO95980 971 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SP1P08047 785 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CHMP24386 653 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 MSX1P28360 303 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 PYCR1P32322 319 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CRISP1P54107 249 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 DUSP8Q13202 625 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CLN3Q13286 438 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF169Q14929 603 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 RHEBQ15382 184 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SF3B4Q15427 424 aaKnown RBP eCLIP4.06□□□□□ -1.767e-11■■■□□ 14.7
TRA2B-215ENST00000492417 SYT14P1Q58G82 188 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ELP2Q6IA86 826 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 MRPL14Q6P1L8 145 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 LRFN4Q6PJG9 635 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 DNM1P34Q6PK57 102 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ARL9Q6T311 187 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 PLXDC2Q6UX71 529 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF782Q6ZMW2 699 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TMPPEQ6ZT21 453 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF283Q8N7M2 679 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TMEM99Q8N816 258 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 BMPERQ8N8U9 685 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 OR2T35Q8NGX2 323 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ZMYND19Q96E35 227 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 PITX2Q99697 317 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CACNG6Q9BXT2 260 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 GORASP2Q9H8Y8 452 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SMURF1Q9HCE7 757 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TCF7L1Q9HCS4 588 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 DCAF16Q9NXF7 216 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 EXTL2Q9UBQ6 330 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 RALYQ9UKM9 306 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 OSGIN2Q9Y236 505 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 EMC9Q9Y3B6 208 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 A0A1W2PR80 420 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 F5H5K5 113 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 J3QLW9 94 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SLC1A7O00341 560 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 OIP5O43482 229 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF19P17023 458 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SQSTM1Q13501 440 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 MFSD13AQ14CX5 517 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 PTGES3Q15185 160 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ATP6AP1Q15904 470 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 C1QL3Q5VWW1 255 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CPOQ8IVL8 374 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ALDH16A1Q8IZ83 802 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 KLHL36Q8N4N3 616 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SLC7A13Q8TCU3 470 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 KLHL15Q96M94 604 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SIGLEC12Q96PQ1 595 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SNX18Q96RF0 628 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 C7orf50Q9BRJ6 194 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 LAT2Q9GZY6 243 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ENKD1Q9H0I2 346 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 MED20Q9H944 212 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 PLEKHA1Q9HB21 404 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 NOP16Q9Y3C1 178 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CREBBPQ92793 2442 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 A0A096LPE4 126 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TEX13CA0A0J9YWL9 993 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 A0A1W2PPZ6 126 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 MEIOCA2RUB1 952 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 OR2M5A3KFT3 312 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CDHR4A6H8M9 788 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 HMX3A6NHT5 357 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ANXA2P2A6NMY6 339 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TXNL1O43396 289 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SSX5O60225 188 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 GMDSO60547 372 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 AGFG2O95081 481 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 GASTP01350 101 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 IGKV1D-16P01601 117 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 ANXA2P07355 339 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 IGFBP1P08833 259 aaPredicted RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CNR1P21554 472 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 VAMP1P23763 118 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 GABRA4P48169 554 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 LIMK1P53667 647 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SLC35A1P78382 337 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 RPL19P84098 196 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 SNTB2Q13425 540 aaKnown RBP4.06□□□□□ -1.76
TRA2B-215ENST00000492417 POU4F3Q15319 338 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 MICAQ29983 383 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TMEM44Q2T9K0 475 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 FAM69AQ5T7M9 428 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CAMKMTQ7Z624 323 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 TMED4Q7Z7H5 227 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 LHFPL3Q86UP9 236 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 CD163Q86VB7 1156 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 LINC00471Q8N535 108 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 YIPF7Q8N8F6 280 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 GDPD1Q8N9F7 314 aa4.06□□□□□ -1.76
TRA2B-215ENST00000492417 APCDD1LQ8NCL9 501 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms