RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ADAM18Q9Y3Q7 739 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 SAMHD1Q9Y3Z3 626 aaKnown RBP14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ABCA12Q86UK0 2595 aa14.22□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 HS3ST1O14792 307 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ENTPD5O75356 428 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CST1P01037 141 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 DNASE1P24855 282 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CAPZA2P47755 286 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 GSSP48637 474 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF84P51523 738 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF133P52736 654 aaPredicted RBP14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FXYD6P3P58550 94 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TSPAN31Q12999 210 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 KEAP1Q14145 624 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 GK3PQ14409 553 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 SMARCD3Q6STE5 483 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 THSD4Q6ZMP0 1018 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 C20orf204Q6ZNR8 217 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FAM122BQ7Z309 247 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ARIH2OSQ8N7S6 290 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 KBTBD8Q8NFY9 601 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 FNDC8Q8TC99 324 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 NANOS1Q8WY41 292 aaKnown RBP14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 AKAP1Q92667 903 aaKnown RBP eCLIP14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 ZNF570Q96NI8 536 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 SLC38A2Q96QD8 506 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 YY1AP1Q9H869 796 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 CCM2LQ9NUG4 571 aaPredicted RBP14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 TMEM38BQ9NVV0 291 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 U3KQV3 271 aa14.21□□□□□ -0.13
MSH5-SAPCD1-206ENST00000491552 IGHV1-18A0A0C4DH31 117 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 ARHGEF9O43307 516 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 ATE1O95260 518 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 SLC2A10O95528 541 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 ERFP50548 548 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 FMODQ06828 376 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 SPOCK1Q08629 439 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 PPP1R8Q12972 351 aaKnown RBP14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 MICAQ29983 383 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 C3orf36Q3SXR2 165 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 ZNF672Q499Z4 452 aaPredicted RBP14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 C10orf128Q5T292 105 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 GPR139Q6DWJ6 353 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 DPY19L2P2Q6ZN68 376 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 LILRB1Q8NHL6 650 aaPredicted RBP14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 NMD3Q96D46 503 aaKnown RBP14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 RADILQ96JH8 1075 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 Q96M85 177 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 OR52D1Q9H346 318 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 SMURF2Q9HAU4 748 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 NRIP3Q9NQ35 241 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 CRNNQ9UBG3 495 aaPredicted RBP14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 IL20RAQ9UHF4 553 aa14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 HRNRQ86YZ3 2850 aaPredicted RBP14.2□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 RAI1Q7Z5J4 1906 aaPredicted RBP14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 PRR14LQ5THK1 2151 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 TEX13CA0A0J9YWL9 993 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 ZNF503-AS2A6NEH8 195 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 SHISA9B4DS77 424 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 EBAG9O00559 213 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 XKRYO14609 159 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 FKBP6O75344 327 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 HLA-HP01893 362 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 CD79AP11912 226 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 CBR1P16152 277 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 CD53P19397 219 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 SDHAP31040 664 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 SLC6A6P31641 620 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 RPS6KA3P51812 740 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 IST1P53990 364 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 CDH11P55287 796 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 KRR1Q13601 381 aaKnown RBP14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 RFX4Q33E94 735 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 MESTQ5EB52 335 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 THEM4Q5T1C6 240 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 C1orf146Q5VVC0 180 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 ZNF770Q6IQ21 691 aaPredicted RBP14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 SLC25A47Q6Q0C1 308 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 ZNF620Q6ZNG0 422 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 ASRGL1Q7L266 308 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 MDP1Q86V88 176 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 SLC22A24Q8N4F4 322 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 CLDN22Q8N7P3 220 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 FAM169BQ8N8A8 192 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 AQP11Q8NBQ7 271 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 PAPD5Q8NDF8 572 aaKnown RBP14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 NEUROG1Q92886 237 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 FBXW5Q969U6 566 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 RASD2Q96D21 266 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 RBP7Q96R05 134 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 IER3IP1Q9Y5U9 82 aa14.19□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 IGKV1D-43A0A0B4J1Z2 117 aa14.18□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 H7C1C5 153 aa14.18□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 GNGT2O14610 69 aa14.18□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 CIB2O75838 187 aa14.18□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 UBL3O95164 117 aa14.18□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 FARS2O95363 451 aaKnown RBP14.18□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 GASTP01350 101 aa14.18□□□□□ -0.14
MSH5-SAPCD1-206ENST00000491552 IGKV3-15P01624 115 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms