RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CD3EP07766 207 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 TSPAN19P0C672 248 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SRD5A2P31213 254 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SLC6A6P31641 620 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 GRK5P34947 590 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 AQP2P41181 271 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 EIF1P41567 113 aaKnown RBP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 RPS5P46782 204 aaKnown RBP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 STARP49675 285 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 MAP2K6P52564 334 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 ART1P52961 327 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 CDH15P55291 814 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 DSCR4P56555 118 aaPredicted RBP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SF3B4Q15427 424 aaKnown RBP eCLIP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SNAPC1Q16533 368 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SLC25A30Q5SVS4 291 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 FOXB2Q5VYV0 432 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 NSUN5P2Q63ZY6 315 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 C5orf46Q6UWT4 87 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 LNX2Q8N448 690 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 TCEANCQ8N8B7 351 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 LRRC75AQ8NAA5 344 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 ATP6V1C2Q8NEY4 427 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 BPIFB6Q8NFQ5 453 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 TSPAN14Q8NG11 270 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 OR2T33Q8NG76 320 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 OR52L1Q8NGH7 329 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 OR8J1Q8NGP2 316 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 OR6S1Q8NH40 331 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 MOSPD2Q8NHP6 518 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SGCDQ92629 289 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 RNASE6Q93091 150 aaKnown RBP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 ZBTB8AQ96BR9 441 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 DNAJA3Q96EY1 480 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SLC38A2Q96QD8 506 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 IFT27Q9BW83 186 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 MRPS26Q9BYN8 205 aaKnown RBP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 POTEKPQ9BYX7 375 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 CALHM2Q9HA72 323 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 NANSQ9NR45 359 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 PLCXD1Q9NUJ7 323 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 PAK1IP1Q9NWT1 392 aaPredicted RBP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 SCOCQ9UIL1 159 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF229Q9UJW7 825 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 DKKL1Q9UK85 242 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 RPH3AQ9Y2J0 694 aaPredicted RBP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 INTS1Q8N201 2190 aaKnown RBP6.73□□□□□ -1.33
CLDN1-202ENST00000490800 NCKAP5O14513 1909 aa6.73□□□□□ -1.33
CLDN1-202ENST00000490800 A0A087WXM4 84 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SH3D21A4FU49 640 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 MBD3L4A6NDZ8 208 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 MBD3L3A6NE82 208 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 MBD3L5A6NJ08 208 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 CD8B2A6NJW9 211 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 LIPT2A6NK58 231 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 TRIM64CA6NLI5 447 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 MCIDASD6RGH6 385 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 PRODHO43272 600 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 TLX2O43763 284 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 OR2T1O43869 369 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 FAM20BO75063 409 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 FZD7O75084 574 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ENTPD6O75354 484 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 AHSA1O95433 338 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SLC2A10O95528 541 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ACTL6AO96019 429 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 HTR1AP08908 422 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 PEPDP12955 493 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 CPN1P15169 458 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 FOSL1P15407 271 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF17P17021 662 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 CTSSP25774 331 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SHC1P29353 583 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 GRPRP30550 384 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ASCL1P50553 236 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 NUDT6P53370 316 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 B3GALT5-AS1P59052 145 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 GABARAPL2P60520 117 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 PRPS1P60891 318 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 CSNK2BP67870 215 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SRYQ05066 204 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 RPL18Q07020 188 aaKnown RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 PIGFQ07326 219 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 FOXF2Q12947 444 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SELENBP1Q13228 472 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ANKDD1AQ495B1 522 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 GLYR1Q49A26 553 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SYT14P1Q58G82 188 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 FAM69AQ5T7M9 428 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 GTF2IRD2BQ6EKJ0 949 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF773Q6PK81 442 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 PLXDC2Q6UX71 529 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 DPY19L2P2Q6ZN68 376 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 NANOGNBQ7Z5D8 188 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 BCDIN3DQ7Z5W3 292 aaKnown RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 GTF2IRD2Q86UP8 949 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 IGFN1Q86VF2 1251 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 C9orf106Q8NAJ2 232 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 OR14L1PQ8NHC6 308 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 MFSD8Q8NHS3 518 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms