RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 OR6C65A6NJZ3 312 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 CRTAPO75718 401 aaPredicted RBP11.75□□□□□ -0.53
SHOX2-205ENST00000490689 CSTBP04080 98 aaKnown RBP11.75□□□□□ -0.53
SHOX2-205ENST00000490689 NMBP08949 121 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 OR2B8PP59922 312 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 MFSD13AQ14CX5 517 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 C2orf76Q3KRA6 126 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 LINC00346Q8IVM7 164 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 EID2Q8N6I1 236 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 OR1J2Q8NGS2 313 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 MIB2Q96AX9 1013 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 ARHGDIGQ99819 225 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 EMC9Q9Y3B6 208 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 A0A0A6YYD5 115 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 GLCEO94923 617 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 CPT2P23786 658 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 NPY4RP50391 375 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 C14orf28Q4W4Y0 310 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 IGSF11Q5DX21 431 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 EOGTQ5NDL2 527 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 RNLSQ5VYX0 342 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 LINC01555Q8NAE3 123 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 SLC2A12Q8TD20 617 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 C10orf90Q96M02 699 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 APOOQ9BUR5 198 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 GAREM1Q9H706 876 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 KCNJ16Q9NPI9 418 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 RHBDD3Q9Y3P4 386 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 CSAG2Q9Y5P2 127 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 ETV7Q9Y603 341 aa11.75□□□□□ -0.53
SHOX2-205ENST00000490689 WDR81Q562E7 1941 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 MEGF11A6BM72 1044 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 STK17BO94768 372 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 GLI4P10075 376 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 CD53P19397 219 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 CNR1P21554 472 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF85Q03923 595 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 DOC2BQ14184 412 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 FAM71CQ8NEG0 241 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 WDR92Q96MX6 357 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 CDC6Q99741 560 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 SLC25A32Q9H2D1 315 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 FKRPQ9H9S5 495 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.74□□□□□ -0.53
SHOX2-205ENST00000490689 B3GALT1Q9Y5Z6 326 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 PUS1Q9Y606 427 aaKnown RBP eCLIP11.74□□□□□ -0.53
SHOX2-205ENST00000490689 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 CCDC163A0A0D9SF12 145 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 TMEM212A6NML5 194 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 IGHA1P01876 353 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 CD14P08571 375 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 HOXB9P17482 250 aaPredicted RBP11.74□□□□□ -0.53
SHOX2-205ENST00000490689 EMP2P54851 167 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 FXYD4P59646 89 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 DUSP2Q05923 314 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 DUSP8Q13202 625 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF273Q14593 569 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 ARHGAP11BQ3KRB8 267 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 PRAMEF8Q5VWM4 474 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 PRAMEF7Q5VXH5 474 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 DPY19L2P2Q6ZN68 376 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 MARCH3Q86UD3 253 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 RFLNBQ8N5W9 214 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 OR5D18Q8NGL1 313 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 WNT2BQ93097 391 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 SLAMF9Q96A28 289 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 SPACA5Q96QH8 159 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 IFT22Q9H7X7 185 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 MSRAQ9UJ68 235 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 P2RX6O15547 441 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 FKTNO75072 461 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 TMIGD3P0DMS9 266 aaPredicted RBP11.74□□□□□ -0.53
SHOX2-205ENST00000490689 BDKRB2P30411 391 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 HOXC8P31273 242 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 RAG2P55895 527 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 VAMP2P63027 116 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 MEF2DQ14814 521 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 C1orf189Q5VU69 101 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 SYS1Q8N2H4 156 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 OR4N2Q8NGD1 307 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 NUDCD2Q8WVJ2 157 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 HSD17B8Q92506 261 aa11.74□□□□□ -0.53
SHOX2-205ENST00000490689 SLC25A21Q9BQT8 299 aaPredicted RBP11.74□□□□□ -0.53
SHOX2-205ENST00000490689 PCDHGA9Q9Y5G4 932 aaKnown RBP11.74□□□□□ -0.53
SHOX2-205ENST00000490689 LOC100289279A0A1B0GTE1 492 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 FAM74A7A6NL05 159 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 CALCBP10092 127 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 MGMTP16455 207 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 RHEBQ15382 184 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 FAM74A3Q4VXF1 159 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 ACOT7LQ6ZUV0 252 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 MAMDC2Q7Z304 686 aaPredicted RBP11.73□□□□□ -0.53
SHOX2-205ENST00000490689 OR2W3Q7Z3T1 314 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 KCNRGQ8N5I3 272 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF565Q8N9K5 539 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 OR1S2Q8NGQ3 325 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 ELP5Q8TE02 316 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 CAPNS2Q96L46 248 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 CMSS1Q9BQ75 279 aaKnown RBP11.73□□□□□ -0.53
SHOX2-205ENST00000490689 SLC6A17Q9H1V8 727 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms