RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 CA10Q9NS85 328 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 C20orf141Q9NUB4 165 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 FAIMQ9NVQ4 179 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 ARGLU1Q9NWB6 273 aaPredicted RBP6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 CMTM6Q9NX76 183 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 SELENONQ9NZV5 590 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 CORO2BQ9UQ03 480 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 RCE1Q9Y256 329 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 POFUT2Q9Y2G5 429 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 SH3GLB1Q9Y371 365 aa6.32□□□□□ -1.4
PRPF4B-208ENST00000490653 MALRD1Q5VYJ5 2156 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 IGKV1D-43A0A0B4J1Z2 117 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 TRAPPC13A5PLN9 417 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 OR6C65A6NJZ3 312 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF726A6NNF4 738 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF99A8MXY4 864 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 VWC2LB2RUY7 222 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 H7C417 338 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 J3KTA2 159 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 CD5LO43866 347 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 PIP5K1CO60331 668 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 FMO6PO60774 539 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 C8BP07358 591 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 ASAH2BP0C7U1 165 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 CD79AP11912 226 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 CCL2P13500 99 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 B4GALT1P15291 398 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 TCN1P20061 433 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 KDELR2P33947 212 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 AQP2P41181 271 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 CAPZA2P47755 286 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 EFNA4P52798 201 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SEC24CP53992 1094 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 PPP2R2BQ00005 443 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SRSF2Q01130 221 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 ZP4Q12836 540 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 CYLC2Q14093 348 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 RAB39AQ14964 217 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 CARTPTQ16568 116 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 TMEM249Q2WGJ8 235 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 MMEL1Q495T6 779 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 KRT80Q6KB66 452 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 C5orf46Q6UWT4 87 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF813Q6ZN06 617 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 DEF8Q6ZN54 512 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SLC35D2Q76EJ3 337 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SPATA21Q7Z572 469 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 PXKQ7Z7A4 578 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 PATL1Q86TB9 770 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF584Q8IVC4 421 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SVOPLQ8N434 492 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 PIK3C3Q8NEB9 887 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 OR6N1Q8NGY5 312 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SLC26A7Q8TE54 656 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 TMEM255BQ8WV15 326 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 RCN3Q96D15 328 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 LRR1Q96L50 414 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 TNFRSF13CQ96RJ3 184 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF347Q96SE7 839 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 EPYCQ99645 322 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SH3GL3Q99963 347 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 ECSITQ9BQ95 431 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SOX7Q9BT81 388 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 KATNB1Q9BVA0 655 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 BARX1Q9HBU1 254 aaPredicted RBP6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 OBP2BQ9NPH6 170 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 FAM53CQ9NYF3 392 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 GLTPQ9NZD2 209 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 MYEF2Q9P2K5 600 aaKnown RBP6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 RHCGQ9UBD6 479 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 RIMS3Q9UJD0 308 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 FZR1Q9UM11 496 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 CORINQ9Y5Q5 1042 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 NOX1Q9Y5S8 564 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 SNX13Q9Y5W8 968 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 PMF1-BGLAPU3KQ54 211 aa6.31□□□□□ -1.4
PRPF4B-208ENST00000490653 IGHV4-61A0A0C4DH41 118 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 LRP5LA4QPB2 252 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 B9A039 149 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 BLOC1S5-TXNDC5H3BN57 136 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 hCG_2039718K7EN88 272 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 RNF13O43567 381 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 TRMUO75648 421 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 OR7A10O76100 309 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 CRYAAP02489 173 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 ADRA2AP08913 450 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 QDPRP09417 244 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 IGHV4-31P0DP07 118 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF35P13682 527 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 ZNF14P17017 642 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 GIPRP48546 466 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 PTDSS1P48651 473 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 CSNK1A1P48729 337 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 RAB1AP62820 205 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 CHRNB3Q05901 458 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 LOXL1Q08397 574 aaPredicted RBP6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 HNRNPA0Q13151 305 aaKnown RBP6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 ETFDHQ16134 617 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 KRTAP24-1Q3LI83 254 aa6.3□□□□□ -1.4
PRPF4B-208ENST00000490653 CYBRD1Q53TN4 286 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms