RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 TAAR3PQ9P1P4 343 aa13.26□□□□□ -0.29
COL2A1-207ENST00000490609 SLC7A8Q9UHI5 535 aa13.26□□□□□ -0.29
COL2A1-207ENST00000490609 CACNG2Q9Y698 323 aa13.26□□□□□ -0.29
COL2A1-207ENST00000490609 DOCK11Q5JSL3 2073 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 LOC105371242A0A075B767 164 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 TMEM89A2RUT3 159 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 C17orf100A8MU93 164 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 M0QX08 132 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 DHHO43323 396 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 PPIHO43447 177 aaKnown RBP13.25□□□□□ -0.29
COL2A1-207ENST00000490609 CHP2O43745 196 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 FMO6PO60774 539 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 RAB36O95755 333 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 CH25HO95992 272 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 TFP02787 698 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 OPN1SWP03999 348 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 ASAH2BP0C7U1 165 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 CD247P20963 164 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 SLC6A2P23975 617 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 RBMXP38159 391 aaKnown RBP13.25□□□□□ -0.29
COL2A1-207ENST00000490609 CCL8P80075 99 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 ENTPD8Q5MY95 495 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 GKAP1Q5VSY0 366 aaPredicted RBP13.25□□□□□ -0.29
COL2A1-207ENST00000490609 THSD4Q6ZMP0 1018 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 CROCCP2Q86T23 111 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 RETREG3Q86VR2 466 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 KRT73Q86Y46 540 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 C10orf53Q8N6V4 93 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 CPEB3Q8NE35 698 aaKnown RBP13.25□□□□□ -0.29
COL2A1-207ENST00000490609 HIPK4Q8NE63 616 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 SLC30A7Q8NEW0 376 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 C7orf26Q96N11 449 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 SEPHS2Q99611 448 aa13.25□□□□□ -0.29
COL2A1-207ENST00000490609 MRPL13Q9BYD1 178 aaKnown RBP13.25□□□□□ -0.29
COL2A1-207ENST00000490609 PRORSD1PA6NEY8 169 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 CPSF4LA6NMK7 179 aaKnown RBP13.24□□□□□ -0.29
COL2A1-207ENST00000490609 PLPP2O43688 288 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 CDC14BO60729 498 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 TGDSO95455 350 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 QDPRP09417 244 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 CRYBB2P43320 205 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 GZMMP51124 257 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 HILS1P60008 231 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 RPS23P62266 143 aaKnown RBP13.24□□□□□ -0.29
COL2A1-207ENST00000490609 MYBPC1Q00872 1141 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 GALK2Q01415 458 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 TUSC1Q2TAM9 212 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 AGKQ53H12 422 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 SPRNQ5BIV9 151 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 AVPI1Q5T686 147 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 RGS7BPQ6MZT1 257 aaPredicted RBP13.24□□□□□ -0.29
COL2A1-207ENST00000490609 C12orf54Q6X4T0 127 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 OR4K5Q8NGD3 323 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 SLC25A44Q96H78 314 aaPredicted RBP13.24□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF347Q96SE7 839 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF607Q96SK3 696 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 CCDC28BQ9BUN5 200 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 OR51B6Q9H340 312 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 ESM1Q9NQ30 184 aa13.24□□□□□ -0.29
COL2A1-207ENST00000490609 HINT3Q9NQE9 182 aaKnown RBP13.24□□□□□ -0.29
COL2A1-207ENST00000490609 IGKV1D-43A0A0B4J1Z2 117 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 SERPINB7O75635 380 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 SNAP29O95721 258 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 PCMT1P22061 227 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 PPIBP23284 216 aaKnown RBP13.23□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF133P52736 654 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-207ENST00000490609 UCP2P55851 309 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 MVKQ03426 396 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 FAHD2BQ6P2I3 314 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-207ENST00000490609 USP43Q70EL4 1123 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 PEG10Q86TG7 708 aaKnown RBP13.23□□□□□ -0.29
COL2A1-207ENST00000490609 RANBP3LQ86VV4 465 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-207ENST00000490609 BHLHE22Q8NFJ8 381 aaPredicted RBP13.23□□□□□ -0.29
COL2A1-207ENST00000490609 OR51F2Q8NH61 342 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 ADAMTS16Q8TE57 1224 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 FAM216AQ8WUB2 273 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 MCHR2Q969V1 340 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF566Q969W8 418 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 TAMM41Q96BW9 452 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 NMD3Q96D46 503 aaKnown RBP13.23□□□□□ -0.29
COL2A1-207ENST00000490609 FAHD2AQ96GK7 314 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 PCDHAC1Q9H158 963 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 ZNF665Q9H7R5 613 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 NKIRAS2Q9NYR9 191 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 NKIRAS1Q9NYS0 192 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 OPN4Q9UHM6 478 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 UGT2A1Q9Y4X1 527 aa13.23□□□□□ -0.29
COL2A1-207ENST00000490609 TRAV20A0A0B4J274 112 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 A0A1W2PPW3 197 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 POLR3GO15318 223 aaPredicted RBP13.22□□□□□ -0.29
COL2A1-207ENST00000490609 MGRN1O60291 552 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 PNPP00491 289 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 FSHBP01225 129 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 TSPAN19P0C672 248 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 WNT5AP41221 380 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 ATP4BP51164 291 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 MTPNP58546 118 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 NCALDP61601 193 aa13.22□□□□□ -0.29
COL2A1-207ENST00000490609 BEND6Q5SZJ8 279 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms