RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HTR3EA5X5Y0 456 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 CENPBD1B2RD01 187 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 TRMUO75648 421 aaKnown RBP17.1■□□□□ 0.33
SMC4-222ENST00000490207 SAGP10523 405 aaPredicted RBP17.1■□□□□ 0.33
SMC4-222ENST00000490207 ACADSP16219 412 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 THBS4P35443 961 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 RAB1AP62820 205 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 LSM11P83369 360 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMC4-222ENST00000490207 MYBPC1Q00872 1141 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 DAG1Q14118 895 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 KRTAP21-3Q3LHN1 58 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 ALG10Q5BKT4 473 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 KRT80Q6KB66 452 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 SKA3Q8IX90 412 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 SLC22A24Q8N4F4 322 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 RBM15BQ8NDT2 890 aaKnown RBP17.1■□□□□ 0.33
SMC4-222ENST00000490207 MCHR2Q969V1 340 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 ZNF75AQ96N20 296 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 SORCS2Q96PQ0 1159 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 SEPHS2Q99611 448 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 ADA2Q9NZK5 511 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 EGFL7Q9UHF1 273 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 RPS6KA6Q9UK32 745 aa17.1■□□□□ 0.33
SMC4-222ENST00000490207 NPIPB13A6NJU9 1138 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 NPIPB4C9JG80 1138 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 FFAR1O14842 300 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 PRSS23O95084 383 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 FARS2O95363 451 aaKnown RBP17.09■□□□□ 0.33
SMC4-222ENST00000490207 CSF3P09919 207 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 OR8G3PP0DMU2 310 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 NPR2P20594 1047 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 PCSK6P29122 969 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 ZNF84P51523 738 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 KRTAP1-1Q07627 177 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 TOP3AQ13472 1001 aaPredicted RBP17.09■□□□□ 0.33
SMC4-222ENST00000490207 HIST3H3Q16695 136 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 CYP4Z1Q86W10 505 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 SYT14Q8NB59 555 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 OR10H5Q8NGA6 315 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 ACOT11Q8WXI4 607 aaPredicted RBP17.09■□□□□ 0.33
SMC4-222ENST00000490207 MRPL13Q9BYD1 178 aaKnown RBP17.09■□□□□ 0.33
SMC4-222ENST00000490207 PLK3Q9H4B4 646 aa17.09■□□□□ 0.33
SMC4-222ENST00000490207 VSTM5A8MXK1 200 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 hCG_2039718K7EN88 272 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 LY6HO94772 140 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 PATE4P0C8F1 98 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 MAKP20794 623 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 PPOXP50336 477 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 PRKCDQ05655 676 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 RAB39AQ14964 217 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 LAPTM4AQ15012 233 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 TAF11Q15544 211 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 ARMC4Q5T2S8 1044 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 GLYATQ6IB77 296 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 ZNF730Q6ZMV8 503 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 MEX3DQ86XN8 651 aaKnown RBP17.08■□□□□ 0.32
SMC4-222ENST00000490207 OR4K5Q8NGD3 323 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 FGFBP3Q8TAT2 258 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 FAM168AQ92567 244 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 HDAC2Q92769 488 aaKnown RBP17.08■□□□□ 0.32
SMC4-222ENST00000490207 SH3GL3Q99963 347 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 VRK1Q99986 396 aaPredicted RBP17.08■□□□□ 0.32
SMC4-222ENST00000490207 TXNIPQ9H3M7 391 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 ENPP4Q9Y6X5 453 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 TLN2Q9Y4G6 2542 aa17.08■□□□□ 0.32
SMC4-222ENST00000490207 FN1P02751 2386 aaKnown RBP17.08■□□□□ 0.32
SMC4-222ENST00000490207 TRAV27A0A087WT01 109 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 EFCAB9A8MZ26 197 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 INAFM1C9JVW0 142 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 GMNNO75496 209 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 IGHMP01871 453 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 NR2C1P13056 603 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 SLC25A16P16260 332 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 NR4A1P22736 598 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 ZNF133P52736 654 aaPredicted RBP17.07■□□□□ 0.32
SMC4-222ENST00000490207 PPP2R2BQ00005 443 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 GALK2Q01415 458 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 CD47Q08722 323 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 NRN1LQ496H8 165 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 C10orf128Q5T292 105 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 TMEM53Q6P2H8 277 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 MBOAT2Q6ZWT7 520 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 RNF113BQ8IZP6 322 aaKnown RBP17.07■□□□□ 0.32
SMC4-222ENST00000490207 SVOPLQ8N434 492 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 RNF148Q8N7C7 305 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 ANKS4BQ8N8V4 417 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 ANKRD19PQ9H560 264 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 FBXO9Q9UK97 447 aaPredicted RBP17.07■□□□□ 0.32
SMC4-222ENST00000490207 SAMD4AQ9UPU9 718 aaKnown RBP17.07■□□□□ 0.32
SMC4-222ENST00000490207 ARL2BPQ9Y2Y0 163 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 SPEF1Q9Y4P9 236 aa17.07■□□□□ 0.32
SMC4-222ENST00000490207 A0A087WUU8 490 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 A0A096LNT2 108 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 SLC2A10O95528 541 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 F12P00748 615 aaPredicted RBP17.06■□□□□ 0.32
SMC4-222ENST00000490207 TP53P04637 393 aaPredicted RBP17.06■□□□□ 0.32
SMC4-222ENST00000490207 ZNF35P13682 527 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 GPR4P46093 362 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 SLC9A3P48764 834 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 CTXN1P60606 82 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms