RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TSPAN32Q96QS1 320 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 FOXB1Q99853 325 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 KATNB1Q9BVA0 655 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 NELFAQ9H3P2 528 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ARMC1Q9NVT9 282 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 CRNNQ9UBG3 495 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF346Q9UL40 294 aaKnown RBP9.7□□□□□ -0.86
CPSF7-212ENST00000489728 POFUT2Q9Y2G5 429 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
CPSF7-212ENST00000489728 TACC2O95359 2948 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 GNGT2O14610 69 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 ARPC3O15145 178 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 TMCC2O75069 709 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 CD3EP07766 207 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 QDPRP09417 244 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 CDH2P19022 906 aaPredicted RBP9.69□□□□□ -0.86
CPSF7-212ENST00000489728 NPR2P20594 1047 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 ACVR1BP36896 505 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 ARHGDIAP52565 204 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 FXYD6P3P58550 94 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 COX10Q12887 443 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 TOP3AQ13472 1001 aaPredicted RBP9.69□□□□□ -0.86
CPSF7-212ENST00000489728 RFX4Q33E94 735 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 HIKESHIQ53FT3 197 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 LRFN4Q6PJG9 635 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 RASSF6Q6ZTQ3 369 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 MEX3DQ86XN8 651 aaKnown RBP9.69□□□□□ -0.86
CPSF7-212ENST00000489728 WDFY1Q8IWB7 410 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 OR52L1Q8NGH7 329 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 OR52N5Q8NH56 324 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 DNAJC9Q8WXX5 260 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 MCHR2Q969V1 340 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 SLCO4A1Q96BD0 722 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 RBP7Q96R05 134 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 SNX18Q96RF0 628 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 GPA33Q99795 319 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 OR52D1Q9H346 318 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 PLEKHF2Q9H8W4 249 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 TMEM38BQ9NVV0 291 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 VNN3Q9NY84 501 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 NPAP1Q9NZP6 1156 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 CDH10Q9Y6N8 788 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 NBPF19A0A087WUL8 3843 aa9.69□□□□□ -0.86
CPSF7-212ENST00000489728 HRNRQ86YZ3 2850 aaPredicted RBP9.69□□□□□ -0.86
CPSF7-212ENST00000489728 PRSS37A4D1T9 235 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 E2F6O75461 281 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 UBL3O95164 117 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 FARS2O95363 451 aaKnown RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 IGKV3-15P01624 115 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 IGLV1-44P01699 117 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 OR8G3PP0DMU2 310 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 ARR3P36575 388 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 ERVK-25P63136 954 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 MRPS34P82930 218 aaKnown RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 RUNX1T1Q06455 604 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 BSPH1Q075Z2 132 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 CD47Q08722 323 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 KRR1Q13601 381 aaKnown RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 CCNIQ14094 377 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 MESTQ5EB52 335 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 PAMR1Q6UXH9 720 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 THSD4Q6ZMP0 1018 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF813Q6ZN06 617 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF704Q6ZNC4 412 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 C20orf204Q6ZNR8 217 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 FOXL2NBQ6ZUU3 175 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 IGFN1Q86VF2 1251 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 PIAS4Q8N2W9 510 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 AQP11Q8NBQ7 271 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 OR10G2Q8NGC3 310 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 OR9Q2Q8NGE9 314 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 GIPC3Q8TF64 312 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 HDAC2Q92769 488 aaKnown RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 UTP4Q969X6 686 aaKnown RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF837Q96EG3 531 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 RAB3IPQ96QF0 476 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-212ENST00000489728 WACQ9BTA9 647 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 IL20Q9NYY1 176 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 BAIAP2Q9UQB8 552 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 ADAM18Q9Y3Q7 739 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 U3KQV3 271 aa9.68□□□□□ -0.86
CPSF7-212ENST00000489728 ABCA4P78363 2273 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 CACNA1DQ01668 2161 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 RAI1Q7Z5J4 1906 aaPredicted RBP9.67□□□□□ -0.86
CPSF7-212ENST00000489728 SLC22A23A1A5C7 686 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 DPRXA6NFQ7 191 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 GASTP01350 101 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 ANXA8P13928 327 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 B4GALT1P15291 398 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 CBR1P16152 277 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 CD40P25942 277 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 ZNF83P51522 516 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 KRTAP10-9P60411 292 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 ACTR3P61158 418 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 GABPB1Q06547 395 aaPredicted RBP9.67□□□□□ -0.86
CPSF7-212ENST00000489728 ATP6AP1Q15904 470 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 GSG1Q2KHT4 349 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 ZFP1Q6P2D0 407 aa9.67□□□□□ -0.86
CPSF7-212ENST00000489728 SHQ1Q6PI26 577 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms