RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 KIAA1549Q9HCM3 1950 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 IGLV1-36A0A0B4J1U3 117 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 CYTIPO60759 359 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 SYNGR4O95473 234 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 PGA4P0DJD7 388 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 PGA3P0DJD8 388 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 CENPAP49450 140 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 CLRN1P58418 232 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 INAQ16352 499 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 TIGD6Q17RP2 521 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 RPUSD3Q6P087 351 aaKnown RBP19.27■□□□□ 0.68
SMC4-221ENST00000489573 LYPD4Q6UWN0 246 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 UNQ6494/PRO21346Q6UXR6 183 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 LHFPL3Q86UP9 236 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 TAAR6Q96RI8 345 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 TIMP4Q99727 224 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 TP53TG5Q9Y2B4 290 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 TPRP12270 2363 aaKnown RBP19.27■□□□□ 0.68
SMC4-221ENST00000489573 ZFHX4Q86UP3 3567 aa19.27■□□□□ 0.68
SMC4-221ENST00000489573 DAPL1A0PJW8 107 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 ZNF716A6NP11 495 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 AKAP8O43823 692 aaKnown RBP19.27■□□□□ 0.67
SMC4-221ENST00000489573 SELENOFO60613 162 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 TFP02787 698 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 CPN1P15169 458 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 BLVRAP53004 296 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 FMODQ06828 376 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 CAMK2DQ13557 499 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 SLC35F2Q8IXU6 374 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 ZNF511Q8NB15 262 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 WDYHV1Q96HA8 205 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 COG8Q96MW5 612 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 ZNF385AQ96PM9 386 aaKnown RBP19.27■□□□□ 0.67
SMC4-221ENST00000489573 RBP7Q96R05 134 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 TBX5Q99593 518 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 ZNF649Q9BS31 505 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 MCTS1Q9ULC4 181 aaKnown RBP19.27■□□□□ 0.67
SMC4-221ENST00000489573 LHX6Q9UPM6 363 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 CEPT1Q9Y6K0 416 aa19.27■□□□□ 0.67
SMC4-221ENST00000489573 A0A1B0GVC2 190 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 CCDC160A6NGH7 325 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 CENPBD1B2RD01 187 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 H3BSA7 217 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 TAF4O00268 1085 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 KHDRBS3O75525 346 aaKnown RBP19.26■□□□□ 0.67
SMC4-221ENST00000489573 OR2T7P0C7T2 308 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 WNT4P56705 351 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 SPHARQ15513 63 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 C3AR1Q16581 482 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 CARD17Q5XLA6 110 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 CLVS1Q8IUQ0 354 aaPredicted RBP19.26■□□□□ 0.67
SMC4-221ENST00000489573 SIAH3Q8IW03 269 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 KLHL36Q8N4N3 616 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 OR2T27Q8NH04 317 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 FNDC8Q8TC99 324 aa19.26■□□□□ 0.67
SMC4-221ENST00000489573 HSMCR30P0CW71 290 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 NR2C1P13056 603 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 RASGEF1BQ0VAM2 473 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 GALEQ14376 348 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 THEM4Q5T1C6 240 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 OR2G6Q5TZ20 316 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 CHMP1BQ7LBR1 199 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 SLC16A9Q7RTY1 509 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 ERI1Q8IV48 349 aaKnown RBP19.25■□□□□ 0.67
SMC4-221ENST00000489573 TIGD4Q8IY51 512 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 ZIC4Q8N9L1 334 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 OR52N1Q8NH53 320 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 SMAP2Q8WU79 429 aaPredicted RBP19.25■□□□□ 0.67
SMC4-221ENST00000489573 ZCCHC14Q8WYQ9 949 aaKnown RBP19.25■□□□□ 0.67
SMC4-221ENST00000489573 NMD3Q96D46 503 aaKnown RBP19.25■□□□□ 0.67
SMC4-221ENST00000489573 OR2M2Q96R28 347 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 MGLLQ99685 303 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 ALG8Q9BVK2 526 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 MARCH7Q9H992 704 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 CAMK2AQ9UQM7 478 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 CAB39Q9Y376 341 aaPredicted RBP19.25■□□□□ 0.67
SMC4-221ENST00000489573 FLVCR1Q9Y5Y0 555 aa19.25■□□□□ 0.67
SMC4-221ENST00000489573 EPG5Q9HCE0 2579 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 TVP23AA6NH52 213 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 AQP7O14520 342 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 GLO1Q04760 184 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 DOC2BQ14184 412 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 ETFDHQ16134 617 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 PLEKHN1Q494U1 663 aaPredicted RBP19.24■□□□□ 0.67
SMC4-221ENST00000489573 ARMCX4Q5H9R4 360 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 GPR107Q5VW38 600 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 RNF128Q8TEB7 428 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 ABHD3Q8WU67 409 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 PNPLA2Q96AD5 504 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 DGCR14Q96DF8 476 aaKnown RBP19.24■□□□□ 0.67
SMC4-221ENST00000489573 INTS14Q96SY0 518 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 PLSCR2Q9NRY7 297 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 RCE1Q9Y256 329 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 COA3Q9Y2R0 106 aaPredicted RBP19.24■□□□□ 0.67
SMC4-221ENST00000489573 CEP295Q9C0D2 2601 aa19.24■□□□□ 0.67
SMC4-221ENST00000489573 IGKV1D-43A0A0B4J1Z2 117 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 A0A1W2PQL4 384 aaPredicted RBP19.23■□□□□ 0.67
SMC4-221ENST00000489573 GPANK1O95872 356 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 HLA-DQA2P01906 255 aa19.23■□□□□ 0.67
SMC4-221ENST00000489573 CD79BP40259 229 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms