RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SP140LQ9H930 580 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 WDR76Q9H967 626 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 APMAPQ9HDC9 416 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 CHST11Q9NPF2 352 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 AKIP1Q9NQ31 210 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 TIGARQ9NQ88 270 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 KLHL9Q9P2J3 617 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 IL20RAQ9UHF4 553 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 LAMP5Q9UJQ1 280 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 NPIPA1Q9UND3 350 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 RASD1Q9Y272 281 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 CMAHPQ9Y471 501 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 B3GALT1Q9Y5Z6 326 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 HS3ST3B1Q9Y662 390 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 PTPRBP23467 1997 aa5.74□□□□□ -1.49
SF3A3-208ENST00000489537 ASXL3Q9C0F0 2248 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 A0A1W2PQL4 384 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 TMEM72A0PK05 275 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 TMEM200CA6NKL6 621 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 FAM183AA6NL82 134 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 TMEM212A6NML5 194 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 J3QLW9 94 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 GABRPO00591 440 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 RGS5O15539 181 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 LRRTM2O43300 516 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 KHDRBS3O75525 346 aaKnown RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 AQP8O94778 261 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 CDRT1O95170 752 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 PMS2P2O95744 297 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 PTTG1O95997 202 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 APOC1P02654 83 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 CCL4P13236 92 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF823P16415 610 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF19P17023 458 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 GRPRP30550 384 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SRD5A2P31213 254 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 DCTDP32321 178 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 PYCR1P32322 319 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 ACVR1BP36896 505 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 OPRL1P41146 370 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 CYB561P49447 251 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 MLLT10P55197 1068 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 TLE3Q04726 772 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SCN1BQ07699 218 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 PLPPR5Q32ZL2 321 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 NDUFAF6Q330K2 333 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 TBC1D25Q3MII6 688 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 TEX30Q5JUR7 227 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 OR2G6Q5TZ20 316 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 HBMQ6B0K9 141 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 DMKNQ6E0U4 476 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 H3F3CQ6NXT2 135 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 FDX2Q6P4F2 183 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 XKRXQ6PP77 449 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 LRRN1Q6UXK5 716 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 ASB18Q6ZVZ8 466 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 BCDIN3DQ7Z5W3 292 aaKnown RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 TMPRSS12Q86WS5 348 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 KLBQ86Z14 1044 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 UEVLDQ8IX04 471 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SIRT6Q8N6T7 355 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 FADS6Q8N9I5 356 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 CYB561A3Q8NBI2 242 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 CCDC54Q8NEL0 328 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SDR9C7Q8NEX9 313 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 BBS1Q8NFJ9 593 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 CHPT1Q8WUD6 406 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 TM9SF4Q92544 642 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 RPL3LQ92901 407 aaKnown RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 ITFG2Q969R8 447 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SLC25A36Q96CQ1 311 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 KTI12Q96EK9 354 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 COX4I2Q96KJ9 171 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 C4orf36Q96KX1 117 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 Q96M85 177 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 OXGR1Q96P68 337 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 MOGAT1Q96PD6 335 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 LMF1Q96S06 567 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 DDOQ99489 341 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SF3B5Q9BWJ5 86 aaKnown RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 CDADC1Q9BWV3 514 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SMURF1Q9HCE7 757 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 RPRD1BQ9NQG5 326 aaKnown RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 KLHL1Q9NR64 748 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SNTG1Q9NSN8 517 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 PAQR5Q9NXK6 330 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 ABRACLQ9P1F3 81 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 DKKL1Q9UK85 242 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF346Q9UL40 294 aaKnown RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 BOKQ9UMX3 212 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 ZNF281Q9Y2X9 895 aa5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SF3B6Q9Y3B4 125 aaKnown RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 CHCHD2Q9Y6H1 151 aaPredicted RBP5.73□□□□□ -1.49
SF3A3-208ENST00000489537 SEC16AO15027 2179 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 IGHV3-20A0A0C4DH32 117 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 TRBV2A0A0J9YWF9 115 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 MEGF11A6BM72 1044 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 OR6C68A6NDL8 312 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 OR6C65A6NJZ3 312 aa5.72□□□□□ -1.49
SF3A3-208ENST00000489537 LIPT2A6NK58 231 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms