RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 WDR76Q9H967 626 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 FANCFQ9NPI8 374 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 ASCL3Q9NQ33 180 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF275Q9NSD4 429 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-207ENST00000489357 MRPL39Q9NYK5 338 aaKnown RBP7.64□□□□□ -1.19
VTI1A-207ENST00000489357 TAS2R10Q9NYW0 307 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 COMMD3Q9UBI1 195 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 CTSFQ9UBX1 484 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 PISDQ9UG56 409 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 TEKT2Q9UIF3 430 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF281Q9Y2X9 895 aa7.64□□□□□ -1.19
VTI1A-207ENST00000489357 SIRT4Q9Y6E7 314 aaPredicted RBP7.64□□□□□ -1.19
VTI1A-207ENST00000489357 TMED7-TICAM2A0A0A6YYA0 188 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 ZC3H12DA2A288 527 aaKnown RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 PMS2P1A4D2B8 440 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TMEM212A6NML5 194 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 A8MU76 341 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 A8MUA0 341 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 B4E171 279 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 CTDSPLO15194 276 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 SUSD5O60279 629 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 ITGA10O75578 1167 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 AHSA1O95433 338 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 KRT8P05787 483 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 MRPL3P09001 348 aaKnown RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 PTNP21246 168 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 ITPKBP27987 946 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 CRABP1P29762 137 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 THBS2P35442 1172 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TSPAN7P41732 249 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 CDKN2AP42771 156 aaKnown RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 PITPNBP48739 271 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 CCR9P51686 369 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 RPL27P61353 136 aaKnown RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 ERVK-25P63136 954 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 SNTA1Q13424 505 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 QPRTQ15274 297 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 BAK1Q16611 211 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 HSD17B12Q53GQ0 312 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 SLC25A53Q5H9E4 307 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 DNM1P34Q6PK57 102 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TMEM205Q6UW68 189 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 HDDC2Q7Z4H3 204 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 CDC20BQ86Y33 519 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TIGD4Q8IY51 512 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 UBQLNLQ8IYU4 475 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 ZBTB8BQ8NAP8 495 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 GALNT11Q8NCW6 608 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 ZNF248Q8NDW4 579 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 ADPRHL1Q8NDY3 354 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 OR6K6Q8NGW6 343 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 MFSD8Q8NHS3 518 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 SLC22A8Q8TCC7 542 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TAAR8Q969N4 342 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 CLIP3Q96DZ5 547 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 KTI12Q96EK9 354 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 CCDC74BQ96LY2 380 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 Q96M85 177 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 OR6C1Q96RD1 312 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 DCLRE1CQ96SD1 692 aaKnown RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TBX5Q99593 518 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 CTRCQ99895 268 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 C7orf50Q9BRJ6 194 aaKnown RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TRAF4Q9BUZ4 470 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 POTEKPQ9BYX7 375 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 SLITRK2Q9H156 845 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TXNIPQ9H3M7 391 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 RERGLQ9H628 205 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 POLE4Q9NR33 117 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 INIPQ9NRY2 104 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 SLC22A11Q9NSA0 550 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 RBFOX1Q9NWB1 397 aaKnown RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 C14orf119Q9NWQ9 140 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 VSX1Q9NZR4 365 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 AKAP7Q9P0M2 348 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 COPZ2Q9P299 210 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 GNG8Q9UK08 70 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 FBXL4Q9UKA2 621 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 PAIP2BQ9ULR5 123 aaKnown RBP7.63□□□□□ -1.19
VTI1A-207ENST00000489357 TMED7Q9Y3B3 224 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 PKD1L2Q7Z442 2459 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 FREM2Q5SZK8 3169 aa7.63□□□□□ -1.19
VTI1A-207ENST00000489357 ASPMQ8IZT6 3477 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 LOC102723996A0A087X1L8 192 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 A0A0G2JK05 382 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 A0A1W2PQ72 361 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 A0A1W2PRG6 482 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 SHISA3A0PJX4 238 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 FAM25AB3EWG3 89 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 FAM25CB3EWG5 89 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 FAM25GB3EWG6 89 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 E9PI62 339 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 BOLA2-SMG1P6H3BVE0 249 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 SULT1B1O43704 296 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 HPGDSO60760 199 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 ZFAND5O76080 213 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 UBL3O95164 117 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 OR6A2O95222 327 aa7.62□□□□□ -1.19
VTI1A-207ENST00000489357 NUDT14O95848 222 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms