RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 FOLR1P15328 257 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 EIF2S2P20042 333 aaKnown RBP3.06□□□□□ -1.92
XRN1-213ENST00000489241 HMOX2P30519 316 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 AQP2P41181 271 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 MRPL19P49406 292 aaKnown RBP3.06□□□□□ -1.92
XRN1-213ENST00000489241 CRISP1P54107 249 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 PRPS1P60891 318 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 ZNF92Q03936 586 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 ARFRP1Q13795 201 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 NRF1Q16656 503 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 PLCXD3Q63HM9 321 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 OR52W1Q6IF63 320 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 ZNF544Q6NX49 715 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 AKNAQ7Z591 1439 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 RALGPS2Q86X27 583 aaPredicted RBP3.06□□□□□ -1.92
XRN1-213ENST00000489241 OR5B3Q8NH48 314 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 ZNF502Q8TBZ5 544 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 FANK1Q8TC84 345 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 CXorf40AQ8TE69 158 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 GPX8Q8TED1 209 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 TNRQ92752 1358 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 TMEM54Q969K7 222 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 DEFB127Q9H1M4 99 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 SLC25A22Q9H936 323 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 PLGRKTQ9HBL7 147 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 CLN8Q9UBY8 286 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 ING4Q9UNL4 249 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 SLC17A4Q9Y2C5 497 aa3.06□□□□□ -1.92
XRN1-213ENST00000489241 LRRK1Q38SD2 2015 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 FAM231BA6NCW3 169 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 USP27XA6NNY8 438 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 E7ENQ6 273 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 MMP23AO75900 390 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 SUPT7LO94864 414 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 SERPINA5P05154 406 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 ICAM2P13598 275 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 RORCP51449 518 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 ACTA2P62736 377 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 ACTG2P63267 376 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 ACTC1P68032 377 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 ACTA1P68133 377 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 ECH1Q13011 328 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 FZD2Q14332 565 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 KIAA0087Q14695 138 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 NSDHLQ15738 373 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 XKR4Q5GH76 650 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 IL34Q6ZMJ4 242 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 TMEM135Q86UB9 458 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 TGIF2LYQ8IUE0 185 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 ZNF584Q8IVC4 421 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 TMEM61Q8N0U2 210 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 PRELID2Q8N945 189 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 OR9G4Q8NGQ1 327 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 OR52E5Q8NH55 327 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 NEIL3Q8TAT5 605 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 CAPSLQ8WWF8 208 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 UCN3Q969E3 161 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 XPO6Q96QU8 1125 aaKnown RBP3.05□□□□□ -1.92
XRN1-213ENST00000489241 ROGDIQ9GZN7 287 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 BLZF1Q9H2G9 400 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 C8orf33Q9H7E9 229 aaPredicted RBP3.05□□□□□ -1.92
XRN1-213ENST00000489241 UGT1A7Q9HAW7 530 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 UGT1A8Q9HAW9 530 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 CYP3A43Q9HB55 503 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 CCL28Q9NRJ3 127 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 MTCH1Q9NZJ7 389 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 RHBDD3Q9Y3P4 386 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 SLC25A15Q9Y619 301 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 CDH10Q9Y6N8 788 aa3.05□□□□□ -1.92
XRN1-213ENST00000489241 PHF3Q92576 2039 aaKnown RBP3.04□□□□□ -1.92
XRN1-213ENST00000489241 MROH5Q6ZUA9 1318 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 A8MUA0 341 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 HAT1O14929 419 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 BBOX1O75936 387 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 ZNF250P15622 560 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 SRMP19623 302 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 KLK2P20151 261 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 RBMXP38159 391 aaKnown RBP3.04□□□□□ -1.92
XRN1-213ENST00000489241 SLC1A2P43004 574 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 RAB11AP62491 216 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 ADARB1P78563 741 aaKnown RBP3.04□□□□□ -1.92
XRN1-213ENST00000489241 REG3AQ06141 175 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 RAB11BQ15907 218 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 FHL5Q5TD97 284 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 LCN12Q6JVE5 192 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 C11orf42Q8N5U0 333 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 C8orf31Q8N9H6 132 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 LYPD6BQ8NI32 183 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 DTX3LQ8TDB6 740 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 FAM151AQ8WW52 585 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 DCUN1D4Q92564 292 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 KIAA1143Q96AT1 154 aaPredicted RBP3.04□□□□□ -1.92
XRN1-213ENST00000489241 CLSTN2Q9H4D0 955 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 RETNQ9HD89 108 aa3.04□□□□□ -1.92
XRN1-213ENST00000489241 SAMSN1Q9NSI8 373 aaKnown RBP3.04□□□□□ -1.92
XRN1-213ENST00000489241 MTRF1LQ9UGC7 380 aaKnown RBP3.04□□□□□ -1.92
XRN1-213ENST00000489241 GLYATL1P3A0A0U1RQE8 302 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 ZNF816-ZNF321PA0A0X1KG74 233 aa3.03□□□□□ -1.92
XRN1-213ENST00000489241 A0A1B0GVI7 797 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms