RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CMTM6Q9NX76 183 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 GMPR2Q9P2T1 348 aaKnown RBP19.85■□□□□ 0.77
COL9A3-213ENST00000489045 FBXL3Q9UKT7 428 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 MED31Q9Y3C7 131 aa19.85■□□□□ 0.77
COL9A3-213ENST00000489045 PIP5K1CO60331 668 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 ENTPD5O75356 428 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 OR8G3PP0DMU2 310 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 THRBP10828 461 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 AQP2P41181 271 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 RUNX1T1Q06455 604 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 CYB5R2Q6BCY4 276 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 ARPINQ7Z6K5 226 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 ZNF584Q8IVC4 421 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 NOXO1Q8NFA2 376 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 RP9Q8TA86 221 aaKnown RBP19.84■□□□□ 0.77
COL9A3-213ENST00000489045 ASB10Q8WXI3 467 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 ZNF347Q96SE7 839 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 MDFIQ99750 246 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 SH3GL3Q99963 347 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 MRPL37Q9BZE1 423 aaKnown RBP19.84■□□□□ 0.77
COL9A3-213ENST00000489045 INIPQ9NRY2 104 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 SPEF1Q9Y4P9 236 aa19.84■□□□□ 0.77
COL9A3-213ENST00000489045 COL6A5A8TX70 2615 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 MXRA5Q9NR99 2828 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 ERCC1P07992 297 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-213ENST00000489045 IGFBP1P08833 259 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-213ENST00000489045 MDH1P40925 334 aaKnown RBP19.83■□□□□ 0.77
COL9A3-213ENST00000489045 SELENOWP63302 87 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 MYBPC1Q00872 1141 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 GALK2Q01415 458 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 HIST3H3Q16695 136 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 SYT14Q8NB59 555 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 OR4K5Q8NGD3 323 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 MOSPD2Q8NHP6 518 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 NEU4Q8WWR8 484 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-213ENST00000489045 LIPHQ8WWY8 451 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 MCHR2Q969V1 340 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 MRPL24Q96A35 216 aaKnown RBP19.83■□□□□ 0.77
COL9A3-213ENST00000489045 PRRC1Q96M27 445 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 MED4Q9NPJ6 270 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 A4GNTQ9UNA3 340 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 AP3M1Q9Y2T2 418 aa19.83■□□□□ 0.77
COL9A3-213ENST00000489045 DNHD1Q96M86 4753 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 IGHV4-61A0A0C4DH41 118 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 TRMUO75648 421 aaKnown RBP19.82■□□□□ 0.76
COL9A3-213ENST00000489045 FARS2O95363 451 aaKnown RBP19.82■□□□□ 0.76
COL9A3-213ENST00000489045 SERPINA5P05154 406 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 ADRA2AP08913 450 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 TSPAN19P0C672 248 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 COX4I1P13073 169 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 DAOP14920 347 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 GLRXP35754 106 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 DAP3P51398 398 aaKnown RBP19.82■□□□□ 0.76
COL9A3-213ENST00000489045 ST3GAL3Q11203 375 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 CHRFAM7AQ494W8 412 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 GKAP1Q5VSY0 366 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-213ENST00000489045 HDDC2Q7Z4H3 204 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 SLC15A3Q8IY34 581 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 LZICQ8WZA0 190 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 KCNK17Q96T54 332 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 SEPHS2Q99611 448 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 MRPL13Q9BYD1 178 aaKnown RBP19.82■□□□□ 0.76
COL9A3-213ENST00000489045 BPESC1Q9GZL8 116 aa19.82■□□□□ 0.76
COL9A3-213ENST00000489045 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.82■□□□□ 0.765e-12■■■■□ 21.6
COL9A3-213ENST00000489045 FBN1P35555 2871 aaKnown RBP19.81■□□□□ 0.76
COL9A3-213ENST00000489045 STAMBPO95630 424 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 ACADSP16219 412 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 GZMKP49863 264 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 ZNF84P51523 738 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 RPS23P62266 143 aaKnown RBP19.81■□□□□ 0.76
COL9A3-213ENST00000489045 LIPEQ05469 1076 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 FXNQ16595 210 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 IQCCQ4KMZ1 466 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 VTCN1Q7Z7D3 282 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 SYT3Q9BQG1 590 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 TPK1Q9H3S4 243 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 RNF121Q9H920 327 aa19.81■□□□□ 0.76
COL9A3-213ENST00000489045 CENPBD1B2RD01 187 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 CCDC22O60826 627 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 IFI30P13284 250 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 APEHP13798 732 aaKnown RBP19.8■□□□□ 0.76
COL9A3-213ENST00000489045 FUT4P22083 530 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 LSP1P33241 339 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 YAP1P46937 504 aaKnown RBP19.8■□□□□ 0.76
COL9A3-213ENST00000489045 EVX1P49640 407 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 LAPTM4AQ15012 233 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 ARMC4Q5T2S8 1044 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 TMEM53Q6P2H8 277 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 SLC16A14Q7RTX9 510 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 SLC7A8Q9UHI5 535 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 CDC42EP3Q9UKI2 254 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 CUBNO60494 3623 aa19.8■□□□□ 0.76
COL9A3-213ENST00000489045 CXCR6O00574 342 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 NME4O00746 187 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 SYNGR3O43761 229 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 IFNW1P05000 195 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 IFNA8P32881 189 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 SLC7A2P52569 658 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 SLC36A2Q495M3 483 aa19.79■□□□□ 0.76
COL9A3-213ENST00000489045 NRN1LQ496H8 165 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms