RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 KPNA4O00629 521 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-231ENST00000488905 WNT9BO14905 357 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 ERLIN1O75477 346 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 RP2O75695 350 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 LYPD3O95274 346 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 FARS2O95363 451 aaKnown RBP15.77■□□□□ 0.12
HDAC6-231ENST00000488905 PGA4P0DJD7 388 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 PGA3P0DJD8 388 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 GAAP10253 952 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 TMEM33P57088 247 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 MTPNP58546 118 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 SELPLGQ14242 412 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 ALKBH6Q3KRA9 238 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 BEND6Q5SZJ8 279 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-231ENST00000488905 TTC33Q6PID6 262 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-231ENST00000488905 PAQR4Q8N4S7 273 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-231ENST00000488905 SEMA6DQ8NFY4 1073 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 VANGL1Q8TAA9 524 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-231ENST00000488905 ADAMTS16Q8TE57 1224 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 SH3GL3Q99963 347 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 OCEL1Q9H607 264 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 ZNF229Q9UJW7 825 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 SLC7A7Q9UM01 511 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 GRIP1Q9Y3R0 1128 aa15.77■□□□□ 0.12
HDAC6-231ENST00000488905 SLC22A23A1A5C7 686 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 DHHO43323 396 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 PPIHO43447 177 aaKnown RBP15.76■□□□□ 0.11
HDAC6-231ENST00000488905 CLPTM1O96005 669 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 FAM157BP0CG42 384 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 MAGEB1P43366 347 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 KLF3P57682 345 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-231ENST00000488905 AGBL2Q5U5Z8 902 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 LRFN4Q6PJG9 635 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 TSPYL5Q86VY4 417 aaPredicted RBP15.76■□□□□ 0.11
HDAC6-231ENST00000488905 RBM45Q8IUH3 476 aaKnown RBP15.76■□□□□ 0.11
HDAC6-231ENST00000488905 LRRC17Q8N6Y2 441 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 OR4K5Q8NGD3 323 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 OR4D11Q8NGI4 311 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 OR51F2Q8NH61 342 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 ZNF426Q9BUY5 554 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 SLC19A3Q9BZV2 496 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 C1orf198Q9H425 327 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 RABEP2Q9H5N1 569 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 CDH20Q9HBT6 801 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 TREM2Q9NZC2 230 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 TAAR3PQ9P1P4 343 aa15.76■□□□□ 0.11
HDAC6-231ENST00000488905 IGLV3-9A0A075B6K5 115 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 A0A0A6YYJ9 748 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 TRAPPC13A5PLN9 417 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 C17orf100A8MU93 164 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 M0QX08 132 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 VENTXO95231 258 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 SNAP29O95721 258 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 IGHG1P01857 330 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 ASAH2BP0C7U1 165 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 UMPSP11172 480 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 CCL2P13500 99 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 ZNF250P15622 560 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 CD247P20963 164 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 SELENOVP59797 346 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 TMEM53Q6P2H8 277 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 SHQ1Q6PI26 577 aaKnown RBP15.75■□□□□ 0.11
HDAC6-231ENST00000488905 NANOGNBQ7Z5D8 188 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 DPPA2Q7Z7J5 298 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 SLC30A8Q8IWU4 369 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 DPP10Q8N608 796 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 SNX33Q8WV41 574 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 MPP4Q96JB8 637 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 LRRC37BQ96QE4 947 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 TSPAN32Q96QS1 320 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 CGREF1Q99674 301 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 PCDHAC1Q9H158 963 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 OR51B6Q9H340 312 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 GPR160Q9UJ42 338 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 TRIM33Q9UPN9 1127 aa15.75■□□□□ 0.11
HDAC6-231ENST00000488905 ANGPT2O15123 496 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 QDPRP09417 244 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 PCGF2P35227 344 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 CLRN1P58418 232 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 ERVS71-1P61550 626 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 LMO4P61968 165 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 SCGB2A2Q13296 93 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 TBC1D28Q2M2D7 210 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 SLC36A2Q495M3 483 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 NRN1LQ496H8 165 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 SLC16A14Q7RTX9 510 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 PATL1Q86TB9 770 aaKnown RBP15.74■□□□□ 0.11
HDAC6-231ENST00000488905 RETREG3Q86VR2 466 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 NOXO1Q8NFA2 376 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 SYNPRQ8TBG9 265 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 ZFAND2BQ8WV99 257 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 TAMM41Q96BW9 452 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 RNF121Q9H920 327 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 HINT3Q9NQE9 182 aaKnown RBP15.74■□□□□ 0.11
HDAC6-231ENST00000488905 NDUFAF1Q9Y375 327 aa15.74■□□□□ 0.11
HDAC6-231ENST00000488905 TRAV20A0A0B4J274 112 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 BCL10O95999 233 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 PNPP00491 289 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 HIST1H2ABP04908 130 aa15.73■□□□□ 0.11
HDAC6-231ENST00000488905 LCKP06239 509 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms