RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 LRRC17Q8N6Y2 441 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 UBASH3BQ8TF42 649 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 SEPHS2Q99611 448 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 ECSITQ9BQ95 431 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 PRSS27Q9BQR3 290 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 TMEM120AQ9BXJ8 343 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 C1orf198Q9H425 327 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 CCDC134Q9H6E4 229 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 MEPEQ9NQ76 525 aaPredicted RBP11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 TMEM38BQ9NVV0 291 aa11.26□□□□□ -0.61
ATPAF2-207ENST00000488753 SH3PXD2BA1X283 911 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 KPNA4O00629 521 aaPredicted RBP11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 PHF1O43189 567 aaPredicted RBP11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 OR5F1O95221 314 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 ADRA2AP08913 450 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 THRBP10828 461 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 UMPSP11172 480 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 SRD5A1P18405 259 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 RIN1Q13671 783 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 RAB39AQ14964 217 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 HIST3H3Q16695 136 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 RABL3Q5HYI8 236 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 NANOGNBQ7Z5D8 188 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 CARM1Q86X55 608 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 ZCCHC24Q8N2G6 241 aaKnown RBP11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 LIPHQ8WWY8 451 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 STX18Q9P2W9 335 aaKnown RBP11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 REV1Q9UBZ9 1251 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 SH3GLB1Q9Y371 365 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 RTTNQ86VV8 2226 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 FBN3Q75N90 2809 aa11.25□□□□□ -0.61
ATPAF2-207ENST00000488753 A0A1W2PRG6 482 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 HTR3EA5X5Y0 456 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 NPIPB13A6NJU9 1138 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 NPIPB4C9JG80 1138 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 MRASO14807 208 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 LILRA1O75019 489 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 TGFAP01135 160 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 PTHP01270 115 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 QDPRP09417 244 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 DAP3P51398 398 aaKnown RBP11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 ZNF133P52736 654 aaPredicted RBP11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 ARFIP2P53365 341 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 TAS2R41P59536 307 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 MRPS11P82912 194 aaKnown RBP11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 RPL18Q07020 188 aaKnown RBP11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 MELKQ14680 651 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 MSMPQ1L6U9 139 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 SLC36A2Q495M3 483 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 MMEL1Q495T6 779 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 FAM120AOSQ5T036 256 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 ZNF584Q8IVC4 421 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 ARIH2OSQ8N7S6 290 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 PCYOX1LQ8NBM8 494 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 NOXO1Q8NFA2 376 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 ZNF583Q96ND8 569 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 MRPL13Q9BYD1 178 aaKnown RBP11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 CHODLQ9H9P2 273 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 GID8Q9NWU2 228 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 RIMS3Q9UJD0 308 aa11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 ZNF346Q9UL40 294 aaKnown RBP11.24□□□□□ -0.61
ATPAF2-207ENST00000488753 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 LRP5LA4QPB2 252 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 MCIDASD6RGH6 385 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 BLOC1S5-TXNDC5H3BN57 136 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 OR7A10O76100 309 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 SNAP29O95721 258 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 TSPAN19P0C672 248 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 PATE4P0C8F1 98 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 FUT1P19526 365 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 APEX1P27695 318 aaKnown RBP11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 ZNF84P51523 738 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 UGT2B15P54855 530 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 CLRN1P58418 232 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 KLF10Q13118 480 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 TMEM53Q6P2H8 277 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 SLC16A14Q7RTX9 510 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 NKAIN4Q8IVV8 208 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 PHC2Q8IXK0 858 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 SLC30A7Q8NEW0 376 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 OR4K5Q8NGD3 323 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 FGFBP3Q8TAT2 258 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 C10orf82Q8WW14 230 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 TMEM239Q8WW34 195 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 MCHR2Q969V1 340 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 SGTBQ96EQ0 304 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 C1orf159Q96HA4 380 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 SH3GL3Q99963 347 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 SYT3Q9BQG1 590 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 REPIN1Q9BWE0 567 aaKnown RBP11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 TPK1Q9H3S4 243 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 SMURF2Q9HAU4 748 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 SAR1AQ9NR31 198 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 INIPQ9NRY2 104 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 FGFR1OP2Q9NVK5 253 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 GPR160Q9UJ42 338 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 AP3M1Q9Y2T2 418 aa11.23□□□□□ -0.61
ATPAF2-207ENST00000488753 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■■■□ 24.4
ATPAF2-207ENST00000488753 GMNCA6NCL1 334 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms