RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 HDAC2Q92769 488 aaKnown RBP13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 Q96MF0 132 aa13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 NSMCE2Q96MF7 247 aa13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 TXNIPQ9H3M7 391 aa13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 CBLN4Q9NTU7 201 aa13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 FAIMQ9NVQ4 179 aa13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 TMEM38BQ9NVV0 291 aa13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 ZNF346Q9UL40 294 aaKnown RBP13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 FAM32AQ9Y421 112 aaKnown RBP13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 V9GYQ6 96 aa13.85□□□□□ -0.19
CTDSP1-209ENST00000488627 TRAV27A0A087WT01 109 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 IGKV1D-43A0A0B4J1Z2 117 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 NDUFS7O75251 213 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 PTP4A3O75365 173 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 IGHMP01871 453 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 CRYAAP02489 173 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 SAGP10523 405 aaPredicted RBP13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 CALB2P22676 271 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 APOBEC3AP31941 199 aaPredicted RBP13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 GPR4P46093 362 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 OMPP47874 163 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 LIMS1P48059 325 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 SLC9A3P48764 834 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 IDH3GP51553 393 aaPredicted RBP13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 MXRA7P84157 204 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 SEC23BQ15437 767 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 ANKDD1AQ495B1 522 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 FBXL14Q8N1E6 418 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 MUC15Q8N387 334 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 SLC22A24Q8N4F4 322 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 SYT14Q8NB59 555 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 NOXO1Q8NFA2 376 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 OR13C2Q8NGS9 318 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 KCNK17Q96T54 332 aa13.84□□□□□ -0.19
CTDSP1-209ENST00000488627 IGHV2OR16-5A0A0B4J2B6 119 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 MCIDASD6RGH6 385 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 IGHV4-39P01824 125 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 PATE4P0C8F1 98 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 CD79AP11912 226 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 ZNF14P17017 642 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 CAPZA2P47755 286 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 CLRN1P58418 232 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 CTXN1P60606 82 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 RPL27P61353 136 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 MYBPC1Q00872 1141 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 PIGFQ07326 219 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 TAF11Q15544 211 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 GSG1Q2KHT4 349 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 C10orf128Q5T292 105 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 HDDC2Q7Z4H3 204 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 IGFN1Q86VF2 1251 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 CDK20Q8IZL9 346 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 CIARTQ8N365 385 aaPredicted RBP13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 ZNF519Q8TB69 540 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 HTRA1Q92743 480 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 GTPBP3Q969Y2 492 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 TRMT61AQ96FX7 289 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 MS4A3Q96HJ5 214 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 GPA33Q99795 319 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 IL1RAPQ9NPH3 570 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 TAS2R1Q9NYW7 299 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 ACTR3BQ9P1U1 418 aa13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 STX18Q9P2W9 335 aaKnown RBP13.83□□□□□ -0.2
CTDSP1-209ENST00000488627 TRIM64A6NGJ6 449 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 TRIM64BA6NI03 449 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 OR8G3PP0DMU2 310 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 ITGA2P17301 1181 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 ATP6V1B2P21281 511 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 GIPRP48546 466 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 RAB1AP62820 205 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 MS4A2Q01362 244 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 NPRL3Q12980 569 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 SWI5Q1ZZU3 235 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 NRN1LQ496H8 165 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 ZBED5Q49AG3 693 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 SLC25A47Q6Q0C1 308 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 DNM1P46Q6ZS02 220 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 ARHGAP24Q8N264 748 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 CLDN22Q8N7P3 220 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 NUP37Q8NFH4 326 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 IL17RDQ8NFM7 739 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 OR4F15Q8NGB8 312 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 OR4K5Q8NGD3 323 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 OR52J3Q8NH60 311 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 FAM46AQ96IP4 442 aaKnown RBP13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 TSPAN32Q96QS1 320 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 SH3GL3Q99963 347 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 CACNG6Q9BXT2 260 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 GSX1Q9H4S2 264 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 DENND2DQ9H6A0 471 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 CA10Q9NS85 328 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 GDF2Q9UK05 429 aaPredicted RBP13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 SIGLEC7Q9Y286 467 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 TMEM5Q9Y2B1 443 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 UGT2A1Q9Y4X1 527 aa13.82□□□□□ -0.2
CTDSP1-209ENST00000488627 TCRBV5S2A0A599 114 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 SH3PXD2BA1X283 911 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 SLC2A10O95528 541 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 ZNF35P13682 527 aa13.81□□□□□ -0.2
CTDSP1-209ENST00000488627 PTDSS1P48651 473 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms