RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PYURFQ96I23 114 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 NSL1Q96IY1 281 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 TNFRSF13CQ96RJ3 184 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF347Q96SE7 839 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 KCNK17Q96T54 332 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 TXNIPQ9H3M7 391 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 MOV10Q9HCE1 1003 aaKnown RBP12.33□□□□□ -0.44
COL9A2-208ENST00000488463 CBLN4Q9NTU7 201 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 POFUT2Q9Y2G5 429 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 JMJD1CQ15652 2540 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 TRAV27A0A087WT01 109 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 IGKV1D-43A0A0B4J1Z2 117 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 IGHV2OR16-5A0A0B4J2B6 119 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 TRBV4-1A0A0J9YWV2 114 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 A0A1W2PRG6 482 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 B2RBV5 119 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 hCG_2039718K7EN88 272 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 DHHO43323 396 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ATP5HO75947 161 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 IGHG1P01857 330 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 H1F0P07305 194 aaKnown RBP12.32□□□□□ -0.44
COL9A2-208ENST00000488463 QDPRP09417 244 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ACADSP16219 412 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF14P17017 642 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-208ENST00000488463 IFNA8P32881 189 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ARR3P36575 388 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 OMPP47874 163 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 DAP3P51398 398 aaKnown RBP12.32□□□□□ -0.44
COL9A2-208ENST00000488463 IDH3GP51553 393 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-208ENST00000488463 SWI5Q1ZZU3 235 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ALG10Q5BKT4 473 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 C10orf128Q5T292 105 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 AGAP6Q5VW22 663 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 RINLQ6ZS11 566 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 PIWIL3Q7Z3Z3 882 aaKnown RBP12.32□□□□□ -0.44
COL9A2-208ENST00000488463 MUC15Q8N387 334 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 SYT14Q8NB59 555 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 NOXO1Q8NFA2 376 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 OR13C2Q8NGS9 318 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF519Q8TB69 540 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 HTRA1Q92743 480 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 POM121Q96HA1 1249 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 COX4I2Q96KJ9 171 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 Q96MF0 132 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 FAIMQ9NVQ4 179 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 TMEM38BQ9NVV0 291 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 NDE1Q9NXR1 346 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-208ENST00000488463 GDF2Q9UK05 429 aaPredicted RBP12.32□□□□□ -0.44
COL9A2-208ENST00000488463 POU2F3Q9UKI9 436 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 UGT2A1Q9Y4X1 527 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ATP23Q9Y6H3 246 aa12.32□□□□□ -0.44
COL9A2-208ENST00000488463 ABCA1O95477 2261 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 TRIM64A6NGJ6 449 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 TRIM64BA6NI03 449 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 EFCAB9A8MZ26 197 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 PTP4A3O75365 173 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 ATP6V1B2P21281 511 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 APOBEC3AP31941 199 aaPredicted RBP12.31□□□□□ -0.44
COL9A2-208ENST00000488463 GPR4P46093 362 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 SLC9A3P48764 834 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 FABP6P51161 128 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 FXYD6P3P58550 94 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 MXRA7P84157 204 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 MYBPC1Q00872 1141 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 ANKDD1AQ495B1 522 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF730Q6ZMV8 503 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 CCDC121Q6ZUS5 278 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 OAFQ86UD1 273 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 IGFN1Q86VF2 1251 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 CYP4Z1Q86W10 505 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF584Q8IVC4 421 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 DEPDC4Q8N2C3 294 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 SLC22A24Q8N4F4 322 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 CLDN22Q8N7P3 220 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 OR51A7Q8NH64 312 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 NSMCE2Q96MF7 247 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 TSPAN32Q96QS1 320 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 GPA33Q99795 319 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 GSX1Q9H4S2 264 aaPredicted RBP12.31□□□□□ -0.44
COL9A2-208ENST00000488463 CA10Q9NS85 328 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF346Q9UL40 294 aaKnown RBP12.31□□□□□ -0.44
COL9A2-208ENST00000488463 V9GYQ6 96 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 CR1P17927 2039 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 CHD3Q12873 2000 aaKnown RBP12.31□□□□□ -0.44
COL9A2-208ENST00000488463 HIVEP2P31629 2446 aa12.31□□□□□ -0.44
COL9A2-208ENST00000488463 SVEP1Q4LDE5 3571 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 TCRBV5S2A0A599 114 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 MCIDASD6RGH6 385 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 CRYAAP02489 173 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 PATE4P0C8F1 98 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 SAGP10523 405 aaPredicted RBP12.3□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF35P13682 527 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 CALB2P22676 271 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 CLRN1P58418 232 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 CTXN1P60606 82 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 RPL27P61353 136 aaKnown RBP12.3□□□□□ -0.44
COL9A2-208ENST00000488463 MS4A2Q01362 244 aa12.3□□□□□ -0.44
COL9A2-208ENST00000488463 FMODQ06828 376 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms