RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CYLC1P35663 651 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 CSNK1DP48730 415 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 TPMTP51580 245 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 NUP107P57740 925 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 YBEYP58557 167 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 ARL6IP1Q15041 203 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 INAQ16352 499 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 IGFL2Q6UWQ7 119 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 C16orf47Q6ZP98 133 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 NCCRP1Q6ZVX7 275 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 C16orf62Q7Z3J2 963 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 VRK2Q86Y07 508 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 GCNT2Q8N0V5 402 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 BLOC1S5Q8TDH9 187 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 MS4A14Q96JA4 679 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 MCHR1Q99705 422 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 GPA33Q99795 319 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 CITED1Q99966 193 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 HES7Q9BYE0 225 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 POLR2J2Q9GZM3 115 aaKnown RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 POLR2J3Q9H1A7 115 aaKnown RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 NGBQ9NPG2 151 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 NUDT15Q9NV35 164 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 UTP6Q9NYH9 597 aaKnown RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 ODF2LQ9ULJ1 636 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 UBQLN1Q9UMX0 589 aaKnown RBP2.84□□□□□ -1.95
ITGB1-214ENST00000488427 KIF3AQ9Y496 699 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 ASB3Q9Y575 518 aa2.84□□□□□ -1.95
ITGB1-214ENST00000488427 ABCA1O95477 2261 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 A0A0J9YXY3 114 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 A0A1B0GUH1 482 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 TRAPPC3O43617 180 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 GOLGA8HP0CJ92 632 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 PSG2P11465 335 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 GAP43P17677 238 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 CHMLP26374 656 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 ANXA13P27216 316 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 YWHABP31946 246 aaKnown RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 PTGFRP43088 359 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 TDO2P48775 406 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 ST3GAL3Q11203 375 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 SCGB2A2Q13296 93 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 WDR43Q15061 677 aaKnown RBP eCLIP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 NSDHLQ15738 373 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 RABGAP1LQ5R372 815 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 FAM120AOSQ5T036 256 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 CNSTQ6PJW8 725 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 RNF165Q6ZSG1 346 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 CYS1Q717R9 158 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 GDPD3Q7L5L3 318 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 ARL10Q8N8L6 244 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 OR52B4Q8NGK2 314 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 OR4C6Q8NH72 309 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 C7orf33Q8WU49 177 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 ITLN2Q8WWU7 325 aaPredicted RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 MRPS31Q92665 395 aaKnown RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 C19orf60Q96EN9 201 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF285Q96NJ3 590 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 TMEM237Q96Q45 408 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 SECISBP2Q96T21 854 aaKnown RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 ARHGDIGQ99819 225 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 CHIAQ9BZP6 476 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 KRT23Q9C075 422 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 NAT10Q9H0A0 1025 aaKnown RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 DHX33Q9H6R0 707 aaKnown RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 SMYD3Q9H7B4 428 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 SYNDIG1Q9H7V2 258 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 ASF1BQ9NVP2 202 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 PAK1IP1Q9NWT1 392 aaPredicted RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 WRAP73Q9P2S5 460 aaPredicted RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 NUFIP1Q9UHK0 495 aaKnown RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 ANAPC7Q9UJX3 599 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 PRPF19Q9UMS4 504 aaKnown RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 HES2Q9Y543 173 aa2.83□□□□□ -1.96
ITGB1-214ENST00000488427 NYNRINQ9P2P1 1898 aaKnown RBP2.83□□□□□ -1.96
ITGB1-214ENST00000488427 RAI1Q7Z5J4 1906 aaPredicted RBP2.82□□□□□ -1.96
ITGB1-214ENST00000488427 PIKFYVEQ9Y2I7 2098 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 IGLV3-16A0A075B6K0 115 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 A0A1W2PNV4 684 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 PP2D1A8MPX8 630 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 I3L4J1 428 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 SULT2B1O00204 365 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 SUPT7LO94864 414 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 MFN2O95140 757 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 IGLV3-19P01714 112 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 OPN1LWP04000 364 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF32P17041 273 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 DLSTP36957 453 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 RABIFP47224 123 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 HNRNPA3P51991 378 aaKnown RBP2.82□□□□□ -1.96
ITGB1-214ENST00000488427 RAB40BQ12829 278 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 PDZK1IP1Q13113 114 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 LAGE3Q14657 143 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 TRIP10Q15642 601 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 ZNF77Q15935 545 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 TPD52L1Q16890 204 aaPredicted RBP2.82□□□□□ -1.96
ITGB1-214ENST00000488427 KCTD19Q17RG1 926 aaPredicted RBP2.82□□□□□ -1.96
ITGB1-214ENST00000488427 AGBL2Q5U5Z8 902 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 PLBD1Q6P4A8 553 aa2.82□□□□□ -1.96
ITGB1-214ENST00000488427 IGFL3Q6UXB1 125 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms