RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PLP1P60201 277 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 PFN3P60673 137 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 ENPEPQ07075 957 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 EIF4EBP2Q13542 120 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 THEM4Q5T1C6 240 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 RNASEKQ6P5S7 137 aaKnown RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 SLC25A48Q6ZT89 311 aaKnown RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 LHFPL3Q86UP9 236 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 THOC6Q86W42 341 aaKnown RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 PCP2Q8IVA1 136 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 PIANPQ8IYJ0 282 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 PDIK1LQ8N165 341 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 LIX1Q8N485 282 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 SRSF12Q8WXF0 261 aaKnown RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMEM158Q8WZ71 300 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 RASD2Q96D21 266 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 PKNOX2Q96KN3 472 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 BMFQ96LC9 184 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 P2RX4Q99571 388 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 RARRES2Q99969 163 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 FAIM2Q9BWQ8 316 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 GABARAPL3Q9BY60 117 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 CDC42EP4Q9H3Q1 356 aaKnown RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 METTL7AQ9H8H3 244 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 FAM49BQ9NUQ9 324 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 TP53TG5Q9Y2B4 290 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 STARD10Q9Y365 291 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 RRP15Q9Y3B9 282 aaKnown RBP2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 MSH6P52701 1360 aa2.43□□□□□ -2.02
HMGB1P36-201ENST00000487709 NFASCO94856 1347 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 ARHGAP21Q5T5U3 1957 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 A0A1W2PPE3 182 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CIB4A0PJX0 185 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CCDC169A6NNP5 214 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 UBXN8O00124 270 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 AIM2O14862 343 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 EEDO75530 441 aaKnown RBP2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 SNX4O95219 450 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 PRB2P02812 416 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 RETP07949 1114 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 PPOXP50336 477 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 RORCP51449 518 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CCR6P51684 374 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 ACLYP53396 1101 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 LRRC74AQ0VAA2 488 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 BST1Q10588 318 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 TWF1Q12792 350 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 FZD2Q14332 565 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 GK3PQ14409 553 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 GINS1Q14691 196 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 TFDP3Q5H9I0 405 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CCNJQ5T5M9 372 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 OR52W1Q6IF63 320 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 Q6P435 159 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 C19orf35Q6ZS72 473 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CENPQQ7L2Z9 268 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 STRADAQ7RTN6 431 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 FAM228AQ86W67 206 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 OR2L8Q8NGY9 312 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 LKAAEAR1Q8TD35 194 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 STARD8Q92502 1023 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 TUBGCP3Q96CW5 907 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CCDC126Q96EE4 140 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CNDP1Q96KN2 507 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CEP170P1Q96L14 293 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 C12orf42Q96LP6 360 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF285Q96NJ3 590 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 CENPKQ9BS16 269 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 DNTTIP1Q9H147 329 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 SLCO1B3Q9NPD5 702 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 GOLT1BQ9Y3E0 138 aa2.42□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGLV4-60A0A075B6I1 120 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGLV3-22A0A075B6J6 115 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 IGKV2D-24A0A075B6R9 120 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 C9JVG2 144 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 FOXE1O00358 373 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 KMOO15229 486 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 SS18L1O75177 396 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 C1orf105O95561 183 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 RAB3DO95716 219 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF30P17039 623 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 OMGP23515 440 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 BTCP35070 178 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 SSR4P51571 173 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 FGF8P55075 233 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 RPS21P63220 83 aaKnown RBP2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 GUCA2BQ16661 112 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 PRSS58Q8IYP2 241 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 SDR9C7Q8NEX9 313 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 B3GNT7Q8NFL0 401 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 SLC22A8Q8TCC7 542 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 TMEM54Q969K7 222 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF578Q96N58 590 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 LHX9Q9NQ69 397 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 DCAF16Q9NXF7 216 aa2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 ZNF629Q9UEG4 869 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 CENPJQ9HC77 1338 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P36-201ENST00000487709 ATP10AO60312 1499 aa2.4□□□□□ -2.02
HMGB1P36-201ENST00000487709 CARMIL3Q8ND23 1372 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms