RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TAS2R43P59537 309 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 CSNK2A1P68400 391 aaPredicted RBP8.43□□□□□ -1.06
SF3B1-211ENST00000487698 POU4F3Q15319 338 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 HYAL4Q2M3T9 481 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 TP53I3Q53FA7 332 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 HAS2Q92819 552 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 PELI1Q96FA3 418 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 INTS14Q96SY0 518 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 MNTQ99583 582 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 TM9SF2Q99805 663 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 TTTY12Q9BZ98 90 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 TTTY10Q9BZA0 68 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 WDR76Q9H967 626 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 MRPL22Q9NWU5 206 aaKnown RBP8.43□□□□□ -1.06
SF3B1-211ENST00000487698 TXNL4BQ9NX01 149 aaKnown RBP8.43□□□□□ -1.06
SF3B1-211ENST00000487698 CCDC59Q9P031 241 aaKnown RBP8.43□□□□□ -1.06
SF3B1-211ENST00000487698 B4GALT7Q9UBV7 327 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 SSR3Q9UNL2 185 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 POLHQ9Y253 713 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 RASD1Q9Y272 281 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 KLF13Q9Y2Y9 288 aaPredicted RBP8.43□□□□□ -1.06
SF3B1-211ENST00000487698 DNAJC13O75165 2243 aa8.43□□□□□ -1.06
SF3B1-211ENST00000487698 TRDV1A0A1B0GX56 115 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF891A8MT65 544 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 LINC01387J3KSC0 135 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 J3QLW9 94 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 TNFSF11O14788 317 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 PLPP2O43688 288 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 GPANK1O95872 356 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 PGA4P0DJD7 388 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 PGA3P0DJD8 388 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF19P17023 458 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 CD53P19397 219 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 GALP22466 123 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 AGFG1P52594 562 aaKnown RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 CLDN20P56880 219 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 FABP5Q01469 135 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 FMODQ06828 376 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ETFDHQ16134 617 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 DGUOKQ16854 277 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 DMKNQ6E0U4 476 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 TMEM225Q6GV28 225 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SLC25A25Q6KCM7 469 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 HDDC2Q7Z4H3 204 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 GPAT4Q86UL3 456 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 EGFL6Q8IUX8 553 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SYT14Q8NB59 555 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 OR6X1Q8NH79 312 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 TMEM203Q969S6 136 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 RNF166Q96A37 237 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SCMH1Q96GD3 660 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SFXN2Q96NB2 322 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 DCLRE1CQ96SD1 692 aaKnown RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 COQ7Q99807 217 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SRXN1Q9BYN0 137 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 CCDC86Q9H6F5 360 aaKnown RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 EXOSC4Q9NPD3 245 aaKnown RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ST6GALNAC2Q9UJ37 374 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 IGKV1D-43A0A0B4J1Z2 117 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 H0YC42 278 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 MAGEB4O15481 346 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 OGG1O15527 345 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 TRAPPC6AO75865 159 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 VAMP5O95183 116 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ABHD16AO95870 558 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 CELA3AP09093 270 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 INHBBP09529 407 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 GAAP10253 952 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ZNF43P17038 809 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ALOX5APP20292 161 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 RFC3P40938 356 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SERPINB10P48595 397 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 CLDN15P56746 228 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 RAC3P60763 192 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 GLO1Q04760 184 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 HIST3H3Q16695 136 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 RSPO4Q2I0M5 234 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 DNM1P34Q6PK57 102 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 IGFL2Q6UWQ7 119 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 RPTNQ6XPR3 784 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 LINC00299Q6ZSB3 139 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ESPNLQ6ZVH7 1005 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 GALNTL5Q7Z4T8 443 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ZFP62Q8NB50 900 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 NOXO1Q8NFA2 376 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SLC26A10Q8NG04 563 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 OR6N2Q8NGY6 317 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 OTOSQ8NHW6 89 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 RPS4Y2Q8TD47 263 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SNX33Q8WV41 574 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 MRPL48Q96GC5 212 aaKnown RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SLC25A44Q96H78 314 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-211ENST00000487698 PGLYRP3Q96LB9 341 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 EMC6Q9BV81 110 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 RERGLQ9H628 205 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 SIAEQ9HAT2 523 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 ACOXLQ9NUZ1 547 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 GRIP1Q9Y3R0 1128 aa8.42□□□□□ -1.06
SF3B1-211ENST00000487698 PHF3Q92576 2039 aaKnown RBP8.41□□□□□ -1.06
SF3B1-211ENST00000487698 TNRC6AQ8NDV7 1962 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms