RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 C3orf33Q6P1S2 294 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 ZNF765Q7L2R6 523 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 ETFBKMTQ8IXQ9 262 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 RNF113BQ8IZP6 322 aaKnown RBP11.26□□□□□ -0.61
HSPG2-211ENST00000486901 GVQW1Q8N7I0 195 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 CDRT4Q8N9R6 151 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 CHST4Q8NCG5 386 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 OR51A2Q8NGJ7 313 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 OR5M9Q8NGP3 310 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 OR1E3Q8WZA6 343 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 MYADMQ96S97 322 aa11.26□□□□□ -0.61
HSPG2-211ENST00000486901 VRK1Q99986 396 aaPredicted RBP11.26□□□□□ -0.61
HSPG2-211ENST00000486901 C7orf50Q9BRJ6 194 aaKnown RBP11.26□□□□□ -0.61
HSPG2-211ENST00000486901 PARP12Q9H0J9 701 aaKnown RBP11.26□□□□□ -0.61
HSPG2-211ENST00000486901 DNAJB12Q9NXW2 375 aaKnown RBP11.26□□□□□ -0.61
HSPG2-211ENST00000486901 GLSO94925 669 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 KAT7O95251 611 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 AKR1C4P17516 323 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 PBX2P40425 430 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 EIF1AXP47813 144 aaKnown RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 ATP1B3P54709 279 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 EPHA4P54764 986 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 NR0B2Q15466 257 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 MOGAT2Q3SYC2 334 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 Q499Y3 187 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 PM20D2Q8IYS1 436 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 SDR16C5Q8N3Y7 309 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 OR14A16Q8NHC5 309 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 SPACA5Q96QH8 159 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 DPYSL5Q9BPU6 564 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 LDAHQ9H6V9 325 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 TRANK1O15050 2925 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 LMX1BO60663 402 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 SLC25A12O75746 678 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 FARS2O95363 451 aaKnown RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 WNT11O96014 354 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 MAOAP21397 527 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 FOXL2P58012 376 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 HACD4Q5VWC8 232 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 PRAMEF8Q5VWM4 474 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 PRAMEF7Q5VXH5 474 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 FAM109BQ6ICB4 259 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 ZNF425Q6IV72 752 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 PHOSPHO1Q8TCT1 267 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 ROBO4Q8WZ75 1007 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 MIB2Q96AX9 1013 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 OR2A5Q96R48 311 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 SLC17A9Q9BYT1 436 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 FAM96BQ9Y3D0 163 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 ENTPD2Q9Y5L3 495 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 TRAV14DV4A0A0A6YYC5 116 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 KCNJ13O60928 360 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 RAB3DO95716 219 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 DCNP07585 359 aaKnown RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 ST6GAL1P15907 406 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 ALKBH1Q13686 389 aaKnown RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 ENPP2Q13822 863 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 NKAIN2Q5VXU1 208 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 TANGO2Q6ICL3 276 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 STEAP1BQ6NZ63 245 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 TMPPEQ6ZT21 453 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 SLC36A1Q7Z2H8 476 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 RERGQ96A58 199 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 CMSS1Q9BQ75 279 aaKnown RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 JAM3Q9BX67 310 aa11.25□□□□□ -0.61
HSPG2-211ENST00000486901 NKX6-2Q9C056 277 aaPredicted RBP11.25□□□□□ -0.61
HSPG2-211ENST00000486901 EML5Q05BV3 1969 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 KIAA1549LQ6ZVL6 1849 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 PRAMEF2O60811 474 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 CTAG2O75638 210 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 OR2A4O95047 310 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 MPZL1O95297 269 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 HLA-AP01891 365 aaKnown RBP11.24□□□□□ -0.61
HSPG2-211ENST00000486901 SPARCP09486 303 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 GAAP10253 952 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 HPGDP15428 266 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 NFYBP25208 207 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 PRSS3P35030 304 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 RAG2P55895 527 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 GPR18Q14330 331 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 PDSS1Q5T2R2 415 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 LINC00518Q8N0U6 118 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 NR4A3Q92570 626 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 RBM18Q96H35 190 aaKnown RBP11.24□□□□□ -0.61
HSPG2-211ENST00000486901 OR2A7Q96R45 310 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 SLC6A7Q99884 636 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 RPP25Q9BUL9 199 aaKnown RBP11.24□□□□□ -0.61
HSPG2-211ENST00000486901 CYB5R1Q9UHQ9 305 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 SLC22A7Q9Y694 548 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 RIF1Q5UIP0 2472 aaKnown RBP11.24□□□□□ -0.61
HSPG2-211ENST00000486901 GGT3PA6NGU5 568 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 OR6C76A6NM76 312 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 THBS1P07996 1170 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 OR4E1P0C645 316 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 PRICKLE4Q2TBC4 344 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 GAB4Q2WGN9 574 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 EXOSC6Q5RKV6 272 aaKnown RBP11.24□□□□□ -0.61
HSPG2-211ENST00000486901 GLYATL3Q5SZD4 288 aa11.24□□□□□ -0.61
HSPG2-211ENST00000486901 SPICQ8N5J4 248 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms