RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 HTR3AP46098 478 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 FASLGP48023 281 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 EVX1P49640 407 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 GPR50Q13585 617 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CDK5R1Q15078 307 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 HEPHL1Q6MZM0 1159 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 FAAP20Q6NZ36 180 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 NPSR1Q6W5P4 371 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 SLC16A9Q7RTY1 509 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 DVL3Q92997 716 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-216ENST00000486741 TAAR8Q969N4 342 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 PNPLA2Q96AD5 504 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 BARHL1Q9BZE3 327 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 NUDT21O43809 227 aaKnown RBP12.03□□□□□ -0.48
HMGN1-216ENST00000486741 RFPL3O75679 317 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 NR2C1P13056 603 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 GABRB1P18505 474 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 RPL27P61353 136 aaKnown RBP12.03□□□□□ -0.48
HMGN1-216ENST00000486741 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CCDC107Q8WV48 283 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CCDC74BQ96LY2 380 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF160Q9HCG1 818 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 QPCTLQ9NXS2 382 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 RDH8Q9NYR8 311 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 GSKIPQ9P0R6 139 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 KCNE5Q9UJ90 142 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CREBL2O60519 120 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CT45A8P0DMV1 189 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CT45A9P0DMV2 189 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 TGM1P22735 817 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CDKN2AP42771 156 aaKnown RBP12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CT45A2Q5DJT8 189 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 COX15Q7KZN9 410 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 KCTD20Q7Z5Y7 419 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 GPR137CQ8N3F9 429 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 OR5H6Q8NGV6 325 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CDCP1Q9H5V8 836 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 ERVMER34-1Q9H9K5 563 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 MCCC2Q9HCC0 563 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 EMC7Q9NPA0 242 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 NOX1Q9Y5S8 564 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 OIP5O43482 229 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 LCATP04180 440 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF28P17035 718 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 AKR1C4P17516 323 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CSNK1A1P48729 337 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF74Q16587 644 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 RNASE10Q5GAN6 216 aaKnown RBP12.03□□□□□ -0.48
HMGN1-216ENST00000486741 FAM57BQ71RH2 274 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 FTMTQ8N4E7 242 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 POGLUT1Q8NBL1 392 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 LILRB4Q8NHJ6 448 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 THRSPQ92748 146 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 TM4SF19Q96DZ7 209 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 PELI1Q96FA3 418 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 CCDC120Q96HB5 630 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 SPACA5Q96QH8 159 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 MLXQ9UH92 298 aa12.03□□□□□ -0.48
HMGN1-216ENST00000486741 IGHG1P01857 330 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 GLYATL3Q5SZD4 288 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 ABHD17BQ5VST6 288 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 TMEM71Q6P5X7 295 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 OPN5Q6U736 354 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 MVB12AQ96EY5 273 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 HIST1H2AAQ96QV6 131 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 GDF15Q99988 308 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 MICU1Q9BPX6 476 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 LAT2Q9GZY6 243 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 OR51B6Q9H340 312 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 METTL8Q9H825 291 aaKnown RBP12.02□□□□□ -0.48
HMGN1-216ENST00000486741 EVA1AQ9H8M9 152 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 MMP25Q9NPA2 562 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 B3GAT2Q9NPZ5 323 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 ACAD8Q9UKU7 415 aa12.02□□□□□ -0.48
HMGN1-216ENST00000486741 EIF4E2O60573 245 aaKnown RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 IGHV3-9P01782 118 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 S100A6P06703 90 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM225BP0DP42 221 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 RBMS1P29558 406 aaKnown RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 ERP29P30040 261 aaKnown RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 SNRPNP63162 240 aaKnown RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 GPR176Q14439 515 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 OR10K2Q6IF99 312 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 CREB3L1Q96BA8 519 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 SMIM19Q96E16 107 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 NAA11Q9BSU3 229 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 POTEKPQ9BYX7 375 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 C17orf51A8MQB3 221 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 ACOT7O00154 380 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 CRTAPO75718 401 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 RAB3DO95716 219 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 CER1O95813 267 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 GDF1P27539 372 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 LIMS1P48059 325 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 FCN2Q15485 313 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 ZNF704Q6ZNC4 412 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 H1FNTQ75WM6 255 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-216ENST00000486741 CADM4Q8NFZ8 388 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 OR1N1Q8NGS0 311 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms