RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RAP1AP62834 184 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 ADORA2A-AS1P86434 159 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 SNAPC1Q16533 368 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 TSPO2Q5TGU0 170 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 TTC23Q5W5X9 447 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 LEG1Q6P5S2 330 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 C20orf196Q8IYI0 205 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 CYB561A3Q8NBI2 242 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF555Q8NEP9 628 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 SDR9C7Q8NEX9 313 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 TMEM54Q969K7 222 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 CCDC120Q96HB5 630 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 ADAD1Q96M93 576 aaKnown RBP11.29□□□□□ -0.6
HDAC6-229ENST00000486665 ZFP3Q96NJ6 502 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 NMNAT3Q96T66 252 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 CMC2Q9NRP2 79 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 PARPBPQ9NWS1 579 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF226Q9NYT6 803 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 AASSQ9UDR5 926 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 PRSS50Q9UI38 385 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 RCE1Q9Y256 329 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 EMC9Q9Y3B6 208 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 GMPPBQ9Y5P6 360 aa11.29□□□□□ -0.6
HDAC6-229ENST00000486665 NCOA6Q14686 2063 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-229ENST00000486665 SETD2Q9BYW2 2564 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-229ENST00000486665 IGKV1D-43A0A0B4J1Z2 117 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 SLC22A23A1A5C7 686 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 PRSS37A4D1T9 235 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 HSPB2A8KAH6 182 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 H0YAE9 185 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 SLC43A1O75387 559 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 IGHV3-9P01782 118 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 IGHG1P01857 330 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 GNAO1P09471 354 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 OR3A2P47893 321 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 ITGADQ13349 1161 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 KEAP1Q14145 624 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 CRMP1Q14194 572 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 CDSNQ15517 529 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 HSPB2Q16082 182 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 HIST3H3Q16695 136 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 FAM205BPQ63HN1 556 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 LRFN4Q6PJG9 635 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 MED12LQ86YW9 2145 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF100Q8IYN0 542 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 TCEANCQ8N8B7 351 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF610Q8N9Z0 462 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 OR6K3Q8NGY3 331 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 RND1Q92730 232 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 PTP4A1Q93096 173 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 ZNF566Q969W8 418 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
HDAC6-229ENST00000486665 MUS81Q96NY9 551 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 SLC38A2Q96QD8 506 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 IL4I1Q96RQ9 567 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 ALG12Q9BV10 488 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 HCAR1Q9BXC0 346 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 FN3KQ9H479 309 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 MED20Q9H944 212 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 SLC7A10Q9NS82 523 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 GLTPQ9NZD2 209 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 VSX1Q9NZR4 365 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-229ENST00000486665 KLHL21Q9UJP4 597 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 FOXD3Q9UJU5 478 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-229ENST00000486665 RNF6Q9Y252 685 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 GPR52Q9Y2T5 361 aa11.28□□□□□ -0.6
HDAC6-229ENST00000486665 FAM183AA6NL82 134 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 M0R3G1 203 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 XKRYO14609 159 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 TLX2O43763 284 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 AKAP8O43823 692 aaKnown RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 IL18BPO95998 194 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 IFNGP01579 166 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 QDPRP09417 244 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 CSNK1A1P48729 337 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 PCYT1AP49585 367 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 FOXG1P55316 489 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 CLRN1P58418 232 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 FMODQ06828 376 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 ETFDHQ16134 617 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF691Q5VV52 312 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 SLC25A47Q6Q0C1 308 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 TFAP2EQ6VUC0 442 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 USP51Q70EK9 711 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 ADCK1Q86TW2 530 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 JAZF1Q86VZ6 243 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 CPOQ8IVL8 374 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 NOXO1Q8NFA2 376 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 OR6N1Q8NGY5 312 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 FAM81AQ8TBF8 368 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 ZNRF4Q8WWF5 429 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 MCHR2Q969V1 340 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 APH1AQ96BI3 265 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF837Q96EG3 531 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-229ENST00000486665 LRR1Q96L50 414 aa11.27□□□□□ -0.61
HDAC6-229ENST00000486665 TSSK2Q96PF2 358 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms