RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PRSS37A4D1T9 235 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 NPIPA5E9PKD4 350 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 G3V3Y1 287 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 H7C1C5 153 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 AKR7A3O95154 331 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 WDPCPO95876 746 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 F10P00742 488 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 CNR1P21554 472 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 SRD5A2P31213 254 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 PYCR1P32322 319 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 NAA10P41227 235 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 DNASE1L1P49184 302 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 LCN6P62502 163 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNF169Q14929 603 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 MOGQ16653 247 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 RAET1LQ5VY80 246 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 SLC16A9Q7RTY1 509 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 PM20D2Q8IYS1 436 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 OR6V1Q8N148 313 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 SNRNP40Q96DI7 357 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 TSSK2Q96PF2 358 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 MNTQ99583 582 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 UTP23Q9BRU9 249 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 SYT4Q9H2B2 425 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 SIAEQ9HAT2 523 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 CCDC59Q9P031 241 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 LRFN1Q9P244 771 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 NPIPA1Q9UND3 350 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 RPH3AQ9Y2J0 694 aaPredicted RBP13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 CNTRLQ7Z7A1 2325 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 NCKAP5O14513 1909 aa13.06□□□□□ -0.32
POLR2J3-204ENST00000486319 GCN1Q92616 2671 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNF670-ZNF695F2Z2N8 137 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 ZIC3O60481 467 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 CD53P19397 219 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 CELP19835 753 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 GALP22466 123 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 TNFSF10P50591 281 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 OR2B6P58173 313 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 RPS25P62851 125 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 SLC35A1P78382 337 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 HSF1Q00613 529 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNF239Q16600 458 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 TMEM176BQ3YBM2 270 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 CDONQ4KMG0 1287 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 PRR30Q53SZ7 412 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 CD200R1LQ6Q8B3 271 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 SLC35D2Q76EJ3 337 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 VASH1Q7L8A9 365 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 ZBTB46Q86UZ6 589 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNF227Q86WZ6 799 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 EGFL6Q8IUX8 553 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 SNX33Q8WV41 574 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 ASB10Q8WXI3 467 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 RELTQ969Z4 430 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 C4orf36Q96KX1 117 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 DACH2Q96NX9 599 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 SLIRPQ9GZT3 109 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 RNF32Q9H0A6 362 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 RNF167Q9H6Y7 350 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 TMEM185BQ9H7F4 350 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 TXNL4BQ9NX01 149 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 GSTK1Q9Y2Q3 226 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 MRPS18CQ9Y3D5 142 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 A3GALT2U3KPV4 340 aa13.05□□□□□ -0.32
POLR2J3-204ENST00000486319 TRAV17A0A0B4J275 112 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 PNMA8CA0A1B0GUJ8 204 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 TRDV1A0A1B0GX56 115 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 OR2M5A3KFT3 312 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 OR5H15A6NDH6 313 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 GJE1A6NN92 205 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 FAM171A2A8MVW0 826 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 J3QLW9 94 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 SULT2B1O00204 365 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 DCTN6O00399 190 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 SELENOFO60613 162 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 PMS2P2O95744 297 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 HLA-DPB1P04440 258 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 HLA-DOBP13765 273 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNF19P17023 458 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 CRABP1P29762 137 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 FGF9P31371 208 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 SFTPDP35247 375 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 SOX6P35712 828 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 CD96P40200 585 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 POU3F1Q03052 451 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 MELKQ14680 651 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 TRAM1Q15629 374 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 TUBA3EQ6PEY2 450 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 TMPPEQ6ZT21 453 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 KDM8Q8N371 416 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 ZFP41Q8N8Y5 198 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 ZNF511Q8NB15 262 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 MMP27Q9H306 513 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 BOKQ9UMX3 212 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 B9D1Q9UPM9 204 aa13.04□□□□□ -0.32
POLR2J3-204ENST00000486319 NBASA2RRP1 2371 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms