RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 A0A087WV62 115 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF593O00488 134 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-228ENST00000486227 P2RX6O15547 441 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 F10P00742 488 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 SLC2A5P22732 501 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 PRSS3P35030 304 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 THBS2P35442 1172 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 SIRPAP78324 504 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 FAM53BQ14153 422 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 FZD2Q14332 565 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 P2RY14Q15391 338 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 AANATQ16613 207 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM71Q6P5X7 295 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 PAQR6Q6TCH4 344 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 SLC35F3Q8IY50 421 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 KDM8Q8N371 416 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF565Q8N9K5 539 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 DTWD2Q8NBA8 298 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 NT5CQ8TCD5 201 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 THOC3Q96J01 351 aaKnown RBP10.1□□□□□ -0.79
HDAC6-228ENST00000486227 RGCCQ9H4X1 137 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 HINT3Q9NQE9 182 aaKnown RBP10.1□□□□□ -0.79
HDAC6-228ENST00000486227 PARPBPQ9NWS1 579 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 HHLA2Q9UM44 414 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 A0A1W2PPC1 479 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 TRIM64A6NGJ6 449 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 SGCEO43556 437 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 SSX4O60224 188 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 MRPL33O75394 65 aaKnown RBP10.1□□□□□ -0.79
HDAC6-228ENST00000486227 SLC2A10O95528 541 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 DPP4P27487 766 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 SHC1P29353 583 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 GPR3P46089 330 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 TGM4P49221 684 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 C19orf57Q0VDD7 668 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 USF2Q15853 346 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-228ENST00000486227 HYAL4Q2M3T9 481 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 AWAT2Q6E213 333 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF620Q6ZNG0 422 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 PRSS41Q7RTY9 318 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 KCTD20Q7Z5Y7 419 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 ZBTB44Q8NCP5 570 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 C14orf166Q9Y224 244 aaKnown RBP10.1□□□□□ -0.79
HDAC6-228ENST00000486227 CCL27Q9Y4X3 112 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 HRH3Q9Y5N1 445 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 FAM186AA6NE01 2351 aa10.1□□□□□ -0.79
HDAC6-228ENST00000486227 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 A0A0A6YYJ9 748 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 DPM1O60762 260 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 IGHG1P01857 330 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM225BP0DP42 221 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF35P13682 527 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 KIR2DL1P43626 348 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 RNASE10Q5GAN6 216 aaKnown RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 CLLU1Q5K131 121 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 TTC9Q92623 222 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 UCN3Q969E3 161 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 PFDN5Q99471 154 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ZPBPQ9BS86 351 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 GPR160Q9UJ42 338 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 NPFFR2Q9Y5X5 522 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ZC3H12DA2A288 527 aaKnown RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ARGFXA6NJG6 315 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 H0YIG0 161 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 GPRIN2O60269 458 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 PIAS2O75928 621 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 CELA2BP08218 269 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 RAB40ALP0C0E4 278 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ETV5P41161 510 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 SNU13P55769 128 aaKnown RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 CAMK2DQ13557 499 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 RAB40AQ8WXH6 277 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 DDOQ99489 341 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 GSKIPQ9P0R6 139 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF281Q9Y2X9 895 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 EMC9Q9Y3B6 208 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 A0A0D9SG52 128 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ARRDC5A6NEK1 342 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 TRABD2BA6NFA1 517 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 MKRN2OSH3BPM6 223 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 AMY2AP04746 511 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 SNRPBP14678 240 aaKnown RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 NME1P15531 152 aaKnown RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 PPICP45877 212 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 CCR6P51684 374 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM244Q5VVB8 128 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 C8orf44Q96CB5 159 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 SLC25A44Q96H78 314 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 SLC41A2Q96JW4 573 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 TEAD3Q99594 435 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 NXF5Q9H1B4 397 aaKnown RBP10.09□□□□□ -0.79
HDAC6-228ENST00000486227 CHRDQ9H2X0 955 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 NARFLQ9H6Q4 476 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 SIRT5Q9NXA8 310 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 SERTM1A2A2V5 107 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 MPIG6BO95866 241 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 AKAIN1P0CW23 69 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ELK1P19419 428 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 ADH6P28332 368 aa10.09□□□□□ -0.79
HDAC6-228ENST00000486227 PLEKHN1Q494U1 663 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms