RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PDLIM4P50479 330 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 DAP3P51398 398 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 SEC24CP53992 1094 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 CLRN1P58418 232 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 SNTB2Q13425 540 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 LAPTM4AQ15012 233 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 KRT80Q6KB66 452 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 HDDC2Q7Z4H3 204 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 MOSPD2Q8NHP6 518 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 FGFBP3Q8TAT2 258 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 ASB10Q8WXI3 467 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 CMTM5Q96DZ9 223 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 ZNF347Q96SE7 839 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 SEPHS2Q99611 448 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 RAB1BQ9H0U4 201 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 MYLK2Q9H1R3 596 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 SNX13Q9Y5W8 968 aa15.91■□□□□ 0.14
PRPF40A-209ENST00000486100 TLN2Q9Y4G6 2542 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 CRLF1O75462 422 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 TRMUO75648 421 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 FARS2O95363 451 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 ZNF682O95780 498 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 SERPINA5P05154 406 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 ACADSP16219 412 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 NUDT2P50583 147 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 RAB39AQ14964 217 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 NRN1LQ496H8 165 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 ARMC4Q5T2S8 1044 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 SVOPLQ8N434 492 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 ANKS4BQ8N8V4 417 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 GEMIN6Q8WXD5 167 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 BPIFA2Q96DR5 249 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 SH3GL3Q99963 347 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 FNDC11Q9BVV2 318 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 MYOZ1Q9NP98 299 aaPredicted RBP15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 STX18Q9P2W9 335 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 CMAHPQ9Y471 501 aa15.9■□□□□ 0.14
PRPF40A-209ENST00000486100 NPIPB13A6NJU9 1138 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 NPIPB4C9JG80 1138 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 J3KTA2 159 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 NDUFS8O00217 210 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 MGRN1O60291 552 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 PIP5K1CO60331 668 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 IFI30P13284 250 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 FUT4P22083 530 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 GLRXP35754 106 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 ZNF84P51523 738 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 ZNF133P52736 654 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 LSM11P83369 360 aaKnown RBP eCLIP15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 MYBPC1Q00872 1141 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 TRAM2Q15035 370 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 TMEM249Q2WGJ8 235 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 IFI44LQ53G44 452 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 FKBP9P1Q75LS8 142 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 DPPA2Q7Z7J5 298 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 PRIMA1Q86XR5 153 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 OFCC1Q8IZS5 231 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 SYT14Q8NB59 555 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 NOXO1Q8NFA2 376 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 OR4K5Q8NGD3 323 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 TXNIPQ9H3M7 391 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 YAE1D1Q9NRH1 226 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 MAN2C1Q9NTJ4 1040 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 RHCGQ9UBD6 479 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 ABCD2Q9UBJ2 740 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 HIF3AQ9Y2N7 669 aa15.89■□□□□ 0.13
PRPF40A-209ENST00000486100 LOC390937A0A1W2PQ73 354 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 VWC2LB2RUY7 222 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 FFAR1O14842 300 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 SERPINA1P01009 418 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 USF1P22415 310 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 PRDX6P30041 224 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 EVX1P49640 407 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 PSME3P61289 254 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 VLDLRP98155 873 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 GALK2Q01415 458 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 TAF11Q15544 211 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 ALG10Q5BKT4 473 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 C10orf128Q5T292 105 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 ZNF584Q8IVC4 421 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 RNF113BQ8IZP6 322 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 NEU4Q8WWR8 484 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 HSH2DQ96JZ2 352 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 KCTD14Q9BQ13 255 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 RNF121Q9H920 327 aa15.88■□□□□ 0.13
PRPF40A-209ENST00000486100 SH3PXD2BA1X283 911 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 SNX3O60493 162 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 ERCC1P07992 297 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 MAKP20794 623 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 LSP1P33241 339 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 PRKCDQ05655 676 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 FXNQ16595 210 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 ANKDD1AQ495B1 522 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 SLC36A2Q495M3 483 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 GKAP1Q5VSY0 366 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 TMEM53Q6P2H8 277 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 SLC16A14Q7RTX9 510 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 NRMQ8IXM6 262 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 CDK20Q8IZL9 346 aa15.87■□□□□ 0.13
PRPF40A-209ENST00000486100 ZCCHC24Q8N2G6 241 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms