RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 WNT11O96014 354 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 NR2C1P13056 603 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 SLC6A6P31641 620 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 ZNF84P51523 738 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 GABPB1Q06547 395 aaPredicted RBP10.37□□□□□ -0.75
HPS4-214ENST00000485842 KRR1Q13601 381 aaKnown RBP10.37□□□□□ -0.75
HPS4-214ENST00000485842 MESTQ5EB52 335 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 CLEC12AQ5QGZ9 265 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 GPR139Q6DWJ6 353 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 LRFN4Q6PJG9 635 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 SEZ6L2Q6UXD5 910 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 ZNF813Q6ZN06 617 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 DPY19L2P2Q6ZN68 376 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 HS3ST5Q8IZT8 346 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 CLDN22Q8N7P3 220 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 ARIH2OSQ8N7S6 290 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 WDR31Q8NA23 367 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 OR52L1Q8NGH7 329 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 MAGEE2Q8TD90 523 aaPredicted RBP10.37□□□□□ -0.75
HPS4-214ENST00000485842 NSMAFQ92636 917 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 HTRA1Q92743 480 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 MCHR2Q969V1 340 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 ERMAPQ96PL5 475 aaPredicted RBP10.37□□□□□ -0.75
HPS4-214ENST00000485842 RAB3IPQ96QF0 476 aaPredicted RBP10.37□□□□□ -0.75
HPS4-214ENST00000485842 GPX7Q96SL4 187 aaPredicted RBP10.37□□□□□ -0.75
HPS4-214ENST00000485842 KCNK17Q96T54 332 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 ALG12Q9BV10 488 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 MRPL13Q9BYD1 178 aaKnown RBP10.37□□□□□ -0.75
HPS4-214ENST00000485842 NRIP3Q9NQ35 241 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 TBC1D23Q9NUY8 699 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 MGAT4BQ9UQ53 548 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 AP4S1Q9Y587 144 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 CDH10Q9Y6N8 788 aa10.37□□□□□ -0.75
HPS4-214ENST00000485842 ABCA12Q86UK0 2595 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 A0A1W2PPR1 153 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 FAM221AA4D161 298 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 SOCS2O14508 198 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 SOX14O95416 240 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 FASP25445 335 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 LOXP28300 417 aaPredicted RBP10.36□□□□□ -0.75
HPS4-214ENST00000485842 SDHAP31040 664 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 RPS6KA3P51812 740 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 NR1H2P55055 460 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 ACTR3P61158 418 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 BSPH1Q075Z2 132 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 ATP6AP1Q15904 470 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 HIST3H3Q16695 136 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 RFX4Q33E94 735 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 RPL13AP3Q6NVV1 102 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 KLHL17Q6TDP4 642 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 RASSF6Q6ZTQ3 369 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 SSX8Q7RTT4 187 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 FAM122BQ7Z309 247 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 YTHDF3Q7Z739 585 aaKnown RBP10.36□□□□□ -0.75
HPS4-214ENST00000485842 CDC20BQ86Y33 519 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 PYDC1Q8WXC3 89 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 NRGNQ92686 78 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 LURAP1Q96LR2 239 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 RBP7Q96R05 134 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 FEVQ99581 238 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 NIPSNAP1Q9BPW8 284 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 DGCR6LQ9BY27 220 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 PLA2G12AQ9BZM1 189 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 ESRP2Q9H6T0 727 aaKnown RBP10.36□□□□□ -0.75
HPS4-214ENST00000485842 OBP2BQ9NPH6 170 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 ARMC1Q9NVT9 282 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 TMEM38BQ9NVV0 291 aa10.36□□□□□ -0.75
HPS4-214ENST00000485842 MAGED1Q9Y5V3 778 aaPredicted RBP10.36□□□□□ -0.75
HPS4-214ENST00000485842 DCHS2Q6V1P9 2916 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 ABCA4P78363 2273 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 NBPF19A0A087WUL8 3843 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 ARPC4-TTLL3A0A0A6YYG9 625 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 IGKV1D-43A0A0B4J1Z2 117 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 A0A1W2PPL8 197 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 ARRDC5A6NEK1 342 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 DPRXA6NFQ7 191 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 PLAUP00749 431 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 CD3EP07766 207 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 IGFBP1P08833 259 aaPredicted RBP10.35□□□□□ -0.75
HPS4-214ENST00000485842 CD79AP11912 226 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 GSTM3P21266 225 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 PRKACGP22612 351 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 NOS3P29474 1203 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 ARHGDIAP52565 204 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 NCMAPQ5T1S8 102 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 C10orf128Q5T292 105 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 ZNF704Q6ZNC4 412 aaPredicted RBP10.35□□□□□ -0.75
HPS4-214ENST00000485842 AMIGO2Q86SJ2 522 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 JAZF1Q86VZ6 243 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 SLC22A24Q8N4F4 322 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 OR8D4Q8NGM9 314 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 LRTOMTQ8WZ04 291 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 NMD3Q96D46 503 aaKnown RBP10.35□□□□□ -0.75
HPS4-214ENST00000485842 DUS3LQ96G46 650 aaKnown RBP10.35□□□□□ -0.75
HPS4-214ENST00000485842 RERGLQ9H628 205 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 DENND2DQ9H6A0 471 aaPredicted RBP10.35□□□□□ -0.75
HPS4-214ENST00000485842 NTN4Q9HB63 628 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 KIF17Q9P2E2 1029 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 RNF115Q9Y4L5 304 aa10.35□□□□□ -0.75
HPS4-214ENST00000485842 FBN2P35556 2912 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms