RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 LNX2Q8N448 690 aa17.51■□□□□ 0.39
COL6A2-208ENST00000485591 OR2T33Q8NG76 320 aa17.51■□□□□ 0.39
COL6A2-208ENST00000485591 OR4Q3Q8NH05 313 aa17.51■□□□□ 0.39
COL6A2-208ENST00000485591 MCHR2Q969V1 340 aa17.51■□□□□ 0.39
COL6A2-208ENST00000485591 BOD1Q96IK1 185 aa17.51■□□□□ 0.39
COL6A2-208ENST00000485591 RBM4BQ9BQ04 359 aaKnown RBP17.51■□□□□ 0.39
COL6A2-208ENST00000485591 SPOCK3Q9BQ16 436 aa17.51■□□□□ 0.39
COL6A2-208ENST00000485591 USB1Q9BQ65 265 aaKnown RBP17.51■□□□□ 0.39
COL6A2-208ENST00000485591 RBM4Q9BWF3 364 aaKnown RBP17.51■□□□□ 0.39
COL6A2-208ENST00000485591 ACTR6Q9GZN1 396 aa17.51■□□□□ 0.39
COL6A2-208ENST00000485591 TMEFF2Q9UIK5 374 aaPredicted RBP17.51■□□□□ 0.39
COL6A2-208ENST00000485591 CIB4A0PJX0 185 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 RAD51DO75771 328 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 QDPRP09417 244 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 IGFBP5P24593 272 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 GABRA6Q16445 453 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 C10orf128Q5T292 105 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 OR7E24Q6IFN5 339 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 C17orf78Q8N4C9 275 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 OR1K1Q8NGR3 316 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 S100PBPQ96BU1 408 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 ZNF837Q96EG3 531 aaPredicted RBP17.5■□□□□ 0.39
COL6A2-208ENST00000485591 MUS81Q96NY9 551 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 SNX18Q96RF0 628 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 C9orf16Q9BUW7 83 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 DCLRE1BQ9H816 532 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 USE1Q9NZ43 259 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 ENOPH1Q9UHY7 261 aa17.5■□□□□ 0.39
COL6A2-208ENST00000485591 SLC22A23A1A5C7 686 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 PRSS37A4D1T9 235 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 TUBAL3A6NHL2 446 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 ZNF99A8MXY4 864 aaPredicted RBP17.49■□□□□ 0.39
COL6A2-208ENST00000485591 H0YHG0 523 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 H7C1C5 153 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 EI24O14681 340 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 DHHO43323 396 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 ALPLP05186 524 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 HIST1H1CP16403 213 aaKnown RBP17.49■□□□□ 0.39
COL6A2-208ENST00000485591 LCN6P62502 163 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 ESRRGP62508 458 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 MYBPC1Q00872 1141 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 FMODQ06828 376 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 SNTB1Q13884 538 aaKnown RBP17.49■□□□□ 0.39
COL6A2-208ENST00000485591 DAG1Q14118 895 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 PGGHGQ32M88 737 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 THEM4Q5T1C6 240 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 SLC27A4Q6P1M0 643 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 MEX3BQ6ZN04 569 aaKnown RBP17.49■□□□□ 0.39
COL6A2-208ENST00000485591 PTCHD4Q6ZW05 846 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 ZNF627Q7L945 461 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 RBP7Q96R05 134 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 SLC24A3Q9HC58 644 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 VSX1Q9NZR4 365 aaPredicted RBP17.49■□□□□ 0.39
COL6A2-208ENST00000485591 NDRG3Q9UGV2 375 aa17.49■□□□□ 0.39
COL6A2-208ENST00000485591 SPTAN1Q13813 2472 aaKnown RBP17.48■□□□□ 0.39
COL6A2-208ENST00000485591 SH3D21A4FU49 640 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 OR5H1A6NKK0 313 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 MITFO75030 526 aaPredicted RBP17.48■□□□□ 0.39
COL6A2-208ENST00000485591 SLC2A10O95528 541 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 CDH2P19022 906 aaPredicted RBP17.48■□□□□ 0.39
COL6A2-208ENST00000485591 POU1F1P28069 291 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 GRK5P34947 590 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 CDKN2AP42771 156 aaKnown RBP17.48■□□□□ 0.39
COL6A2-208ENST00000485591 ALDH3A2P51648 485 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 CRISP1P54107 249 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 ARF1P84077 181 aaKnown RBP17.48■□□□□ 0.39
COL6A2-208ENST00000485591 TIMM23BQ5SRD1 257 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 SP5Q6BEB4 398 aaPredicted RBP17.48■□□□□ 0.39
COL6A2-208ENST00000485591 ANKRD16Q6P6B7 361 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 P2RY8Q86VZ1 359 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 JAZF1Q86VZ6 243 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 CBR4Q8N4T8 237 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 IQCF1Q8N6M8 205 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 OR4K13Q8NH42 304 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 EME1Q96AY2 570 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 DACH2Q96NX9 599 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 NELFAQ9H3P2 528 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 SLC25A19Q9HC21 320 aa17.48■□□□□ 0.39
COL6A2-208ENST00000485591 USP9YO00507 2555 aaPredicted RBP17.48■□□□□ 0.39
COL6A2-208ENST00000485591 KIR2DL3P43628 341 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 GIPRP48546 466 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 ZNF84P51523 738 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 CDK5Q00535 292 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL6A2-208ENST00000485591 GINS1Q14691 196 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 SLC35F1Q5T1Q4 408 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 C1QTNF12Q5T7M4 302 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 LEG1Q6P5S2 330 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 SLC25A47Q6Q0C1 308 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 OR52E2Q8NGJ4 325 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 LINC01560Q8TB33 94 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 BCL2L2Q92843 193 aaPredicted RBP17.47■□□□□ 0.39
COL6A2-208ENST00000485591 WFIKKN1Q96NZ8 548 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 NMNAT3Q96T66 252 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 FOXB1Q99853 325 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 MED18Q9BUE0 208 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 GABARAPL3Q9BY60 117 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 SYT4Q9H2B2 425 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 KLHL21Q9UJP4 597 aa17.47■□□□□ 0.39
COL6A2-208ENST00000485591 IGKV1D-43A0A0B4J1Z2 117 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms