RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 BIDP55957 195 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 RASGEF1BQ0VAM2 473 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 RNPS1Q15287 305 aaKnown RBP16.4■□□□□ 0.22
ERCC2-205ENST00000485403 TMEM201Q5SNT2 666 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 ARMC4Q5T2S8 1044 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 MEDAGQ5VYS4 303 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 LAIR2Q6ISS4 152 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 PLBD1Q6P4A8 553 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 HDDC2Q7Z4H3 204 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 LIX1LQ8IVB5 337 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 NPEPL1Q8NDH3 523 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 ABHD3Q8WU67 409 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 HDAC2Q92769 488 aaKnown RBP16.4■□□□□ 0.22
ERCC2-205ENST00000485403 GMPPAQ96IJ6 420 aaPredicted RBP16.4■□□□□ 0.22
ERCC2-205ENST00000485403 ZNF582Q96NG8 517 aaPredicted RBP16.4■□□□□ 0.22
ERCC2-205ENST00000485403 GP6Q9HCN6 339 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 GLRX2Q9NS18 164 aa16.4■□□□□ 0.22
ERCC2-205ENST00000485403 H2AFY2Q9P0M6 372 aaPredicted RBP16.4■□□□□ 0.22
ERCC2-205ENST00000485403 ALPK2Q86TB3 2170 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 HCFC1P51610 2035 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 FAM183AA6NL82 134 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 SMNDC1O75940 238 aaKnown RBP eCLIP16.39■□□□□ 0.21
ERCC2-205ENST00000485403 RENP00797 406 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 OPRM1P35372 400 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 CLDN17P56750 224 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 SMN1Q16637 294 aaKnown RBP16.39■□□□□ 0.21
ERCC2-205ENST00000485403 GTF2IRD2BQ6EKJ0 949 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 CREB3L2Q70SY1 520 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 ADCK1Q86TW2 530 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 GTF2IRD2Q86UP8 949 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 BPIFB6Q8NFQ5 453 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 YTHDF1Q9BYJ9 559 aaKnown RBP16.39■□□□□ 0.21
ERCC2-205ENST00000485403 MED20Q9H944 212 aa16.39■□□□□ 0.21
ERCC2-205ENST00000485403 ING1Q9UK53 422 aaPredicted RBP16.39■□□□□ 0.21
ERCC2-205ENST00000485403 PKDREJQ9NTG1 2253 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 CENPEQ02224 2701 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 SH3D21A4FU49 640 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 ZNF726A6NNF4 738 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 ZNF716A6NP11 495 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 H7C1C5 153 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 M0R3G1 203 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 DVL2O14641 736 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 SS18L1O75177 396 aaPredicted RBP16.38■□□□□ 0.21
ERCC2-205ENST00000485403 CLDN14O95500 239 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 RPSAP08865 295 aaKnown RBP16.38■□□□□ 0.21
ERCC2-205ENST00000485403 KIR2DL2P43627 348 aaPredicted RBP16.38■□□□□ 0.21
ERCC2-205ENST00000485403 SLC16A1P53985 500 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 LCN6P62502 163 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 RUNX1T1Q06455 604 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 AADACL4Q5VUY2 407 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 MCEMP1Q8IX19 187 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 RELL2Q8NC24 303 aaPredicted RBP16.38■□□□□ 0.21
ERCC2-205ENST00000485403 BBS1Q8NFJ9 593 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 CA5BP1Q8WTZ4 195 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 PTP4A1Q93096 173 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 ADAD1Q96M93 576 aaKnown RBP16.38■□□□□ 0.21
ERCC2-205ENST00000485403 DDOQ99489 341 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 EMC6Q9BV81 110 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 KLHL9Q9P2J3 617 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 FLVCR1Q9Y5Y0 555 aa16.38■□□□□ 0.21
ERCC2-205ENST00000485403 ASH1LQ9NR48 2969 aaKnown RBP16.37■□□□□ 0.21
ERCC2-205ENST00000485403 PRSS37A4D1T9 235 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 SLC35F4A4IF30 521 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 OR6C68A6NDL8 312 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 AKAP8O43823 692 aaKnown RBP16.37■□□□□ 0.21
ERCC2-205ENST00000485403 FAM20BO75063 409 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 TRMUO75648 421 aaKnown RBP16.37■□□□□ 0.21
ERCC2-205ENST00000485403 BMP5P22003 454 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 NUDT6P53370 316 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 CXCR4P61073 352 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 SLC25A35Q3KQZ1 300 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 RBM48Q5RL73 367 aaKnown RBP16.37■□□□□ 0.21
ERCC2-205ENST00000485403 NXNL2Q5VZ03 156 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 FAM214BQ7L5A3 538 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 GID4Q8IVV7 300 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 ZIC4Q8N9L1 334 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 OR6X1Q8NH79 312 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 ZNF775Q96BV0 537 aaPredicted RBP16.37■□□□□ 0.21
ERCC2-205ENST00000485403 ZNF385AQ96PM9 386 aaKnown RBP16.37■□□□□ 0.21
ERCC2-205ENST00000485403 PSMG3-AS1Q96PY0 264 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 SNX18Q96RF0 628 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 OR51V1Q9H2C8 321 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 BCO1Q9HAY6 547 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 MYRFQ9Y2G1 1151 aa16.37■□□□□ 0.21
ERCC2-205ENST00000485403 IGKV3D-15A0A087WSY6 115 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 SNTNA6NMZ2 147 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 SLC1A7O00341 560 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 PRODHO43272 600 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 XPNPEP2O43895 674 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 IGHG1P01857 330 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 SLC25A1P53007 311 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 CSNK2BP67870 215 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 KLHL12Q53G59 568 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 WDFY1Q8IWB7 410 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 OR9Q1Q8NGQ5 310 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 ZNF566Q969W8 418 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 STARD4Q96DR4 205 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 SLC25A44Q96H78 314 aaPredicted RBP16.36■□□□□ 0.21
ERCC2-205ENST00000485403 ALG12Q9BV10 488 aa16.36■□□□□ 0.21
ERCC2-205ENST00000485403 HCAR1Q9BXC0 346 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms