RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 OR5M9Q8NGP3 310 aa18.17■□□□□ 0.5
VCPKMT-203ENST00000484763 FNDC8Q8TC99 324 aa18.17■□□□□ 0.5
VCPKMT-203ENST00000484763 ZNRF4Q8WWF5 429 aa18.17■□□□□ 0.5
VCPKMT-203ENST00000484763 TMEM80Q96HE8 168 aa18.17■□□□□ 0.5
VCPKMT-203ENST00000484763 RBP7Q96R05 134 aa18.17■□□□□ 0.5
VCPKMT-203ENST00000484763 RACGAP1Q9H0H5 632 aa18.17■□□□□ 0.5
VCPKMT-203ENST00000484763 CLCF1Q9UBD9 225 aa18.17■□□□□ 0.5
VCPKMT-203ENST00000484763 TRIM64CA6NLI5 447 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 ZNF432O94892 652 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 FADS2O95864 444 aaKnown RBP18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 CLPTM1O96005 669 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 MT-ND2P03891 347 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 CTLA4P16410 223 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 PTGS2P35354 604 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 THEM4Q5T1C6 240 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 LINC01590Q5TEZ4 76 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 MCEMP1Q8IX19 187 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 TMEM123Q8N131 208 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 OR52I1Q8NGK6 324 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 TMEM45BQ96B21 275 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 SNRNP40Q96DI7 357 aaKnown RBP18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 ZMYND19Q96E35 227 aaPredicted RBP18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 SLX1AQ9BQ83 275 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 RERGLQ9H628 205 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 RNF122Q9H9V4 155 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 BCO1Q9HAY6 547 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 DIMT1Q9UNQ2 313 aaKnown RBP18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 B9D1Q9UPM9 204 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 EXOGQ9Y2C4 368 aaKnown RBP18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 COMMD3-BMI1R4GMX3 469 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 APOL3O95236 402 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 RAB36O95755 333 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 C21orf33P30042 268 aaPredicted RBP18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 FMODQ06828 376 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 B3GNT6Q6ZMB0 384 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 SPARTQ8N0X7 666 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 POMGNT2Q8NAT1 580 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 ZNF775Q96BV0 537 aaPredicted RBP18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 FGF20Q9NP95 211 aaPredicted RBP18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 SVILO95425 2214 aa18.16■□□□□ 0.5
VCPKMT-203ENST00000484763 TPRP12270 2363 aaKnown RBP18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 ITPR1Q14643 2758 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 IGLV1-36A0A0B4J1U3 117 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 ZNF724A8MTY0 619 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 FAM171A2A8MVW0 826 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 AHRRA9YTQ3 701 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 TGM6O95932 706 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 DCKP27707 260 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 CSNK1A1P48729 337 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 CENPAP49450 140 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 SELENOPP49908 381 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 MVKQ03426 396 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 SF3B4Q15427 424 aaKnown RBP eCLIP18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 HIST3H3Q16695 136 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 SHFQ7M4L6 423 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 AAED1Q7RTV5 226 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 P4HA3Q7Z4N8 544 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 SVOPQ8N4V2 548 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 OR4F15Q8NGB8 312 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 NMD3Q96D46 503 aaKnown RBP18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 TRIB1Q96RU8 372 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 CNN2Q99439 309 aaKnown RBP18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 ADGRL4Q9HBW9 690 aa18.15■□□□□ 0.5
VCPKMT-203ENST00000484763 BLVRAP53004 296 aa18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 BLMHQ13867 455 aa18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 TUSC5Q8IXB3 177 aa18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 OR6N1Q8NGY5 312 aa18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 INTS12Q96CB8 462 aaKnown RBP18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 CDCA4Q9BXL8 241 aa18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 GP6Q9HCN6 339 aa18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 VCX3AQ9NNX9 186 aa18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 GLTPQ9NZD2 209 aa18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 NOSIPQ9Y314 301 aaKnown RBP18.14■□□□□ 0.5
VCPKMT-203ENST00000484763 MAP1BP46821 2468 aaKnown RBP18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 SLC43A1O75387 559 aa18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 KHDRBS3O75525 346 aaKnown RBP18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 YES1P07947 543 aa18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 MRPL3P09001 348 aaKnown RBP18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 SBK2P0C263 348 aa18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 GLO1Q04760 184 aa18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 ACSF3Q4G176 576 aaPredicted RBP18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 PRR30Q53SZ7 412 aaPredicted RBP18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 ZNF585AQ6P3V2 769 aa18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 TMEM54Q969K7 222 aa18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 ASF1BQ9NVP2 202 aa18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 FOXD3Q9UJU5 478 aaPredicted RBP18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 PCDHGB1Q9Y5G3 927 aa18.14■□□□□ 0.49
VCPKMT-203ENST00000484763 GTF3C1Q12789 2109 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 ADRA2AP08913 450 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 MYL12AP19105 171 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 NTF4P34130 210 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 ETFDHQ16134 617 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 KCTD8Q6ZWB6 473 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 MCHR2Q969V1 340 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 GLRX2Q9NS18 164 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 PARPBPQ9NWS1 579 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 CLEC4AQ9UMR7 237 aa18.13■□□□□ 0.49
VCPKMT-203ENST00000484763 IGKV1D-43A0A0B4J1Z2 117 aa18.12■□□□□ 0.49
VCPKMT-203ENST00000484763 J3QRE1 110 aa18.12■□□□□ 0.49
VCPKMT-203ENST00000484763 WDR1O75083 606 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms