RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 GABRA6Q16445 453 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 FGD3Q5JSP0 725 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 DOPEY1Q5JWR5 2465 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 PGM2L1Q6PCE3 622 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 PODNL1Q6PEZ8 512 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 TBPL2Q6SJ96 375 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 NHLRC1Q6VVB1 395 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 TMPRSS11FQ6ZWK6 438 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 SLC46A3Q7Z3Q1 461 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 PIWIL3Q7Z3Z3 882 aaKnown RBP7.82□□□□□ -1.16
COL8A1-207ENST00000483969 HDDC2Q7Z4H3 204 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 OAFQ86UD1 273 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 ZDHHC21Q8IVQ6 265 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 AQP12AQ8IXF9 295 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 NRMQ8IXM6 262 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 C20orf196Q8IYI0 205 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 C17orf78Q8N4C9 275 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 FAM86B1Q8N7N1 296 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 C1orf162Q8NEQ5 155 aaPredicted RBP7.82□□□□□ -1.16
COL8A1-207ENST00000483969 OR6N1Q8NGY5 312 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 OR6X1Q8NH79 312 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 SLC7A13Q8TCU3 470 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 TXNDC15Q96J42 360 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 CLPTM1LQ96KA5 538 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 LURAP1Q96LR2 239 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 OR2M2Q96R28 347 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 EMC6Q9BV81 110 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 ESRP2Q9H6T0 727 aaKnown RBP7.82□□□□□ -1.16
COL8A1-207ENST00000483969 INIPQ9NRY2 104 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 MAN2C1Q9NTJ4 1040 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 C20orf141Q9NUB4 165 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 STX18Q9P2W9 335 aaKnown RBP7.82□□□□□ -1.16
COL8A1-207ENST00000483969 AURKCQ9UQB9 309 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 SVILO95425 2214 aa7.82□□□□□ -1.16
COL8A1-207ENST00000483969 USP9XQ93008 2570 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 TCRBV5S2A0A599 114 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 MCIDASD6RGH6 385 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 ACOT8O14734 319 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 KLF4O43474 513 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 RAD51DO75771 328 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 DIRAS1O95057 198 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 HRGP04196 525 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 ITGA5P08648 1049 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 CDH2P19022 906 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 MAKP20794 623 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 ATP6V1B2P21281 511 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 GIPRP48546 466 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 CSNK1A1P48729 337 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 DAP3P51398 398 aaKnown RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 HMGA2P52926 109 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 SH3BGRP55822 239 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 BIDP55957 195 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 PRPS1P60891 318 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 SPIBQ01892 262 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 ROR2Q01974 943 aaKnown RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 RPL18Q07020 188 aaKnown RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 CAMK2DQ13557 499 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 PPA1Q15181 289 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 ZBED5Q49AG3 693 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 IQCCQ4KMZ1 466 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 ALG10Q5BKT4 473 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 C9orf135Q5VTT2 229 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 CARD17Q5XLA6 110 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 ANKRD16Q6P6B7 361 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 KLHL17Q6TDP4 642 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 KLHL24Q6TFL4 600 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 CDC20BQ86Y33 519 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 CCDC36Q8IYA8 594 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 TMEM123Q8N131 208 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 LINC00471Q8N535 108 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 OR52J3Q8NH60 311 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 OR51A7Q8NH64 312 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 ZNF566Q969W8 418 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 CCDC124Q96CT7 223 aaKnown RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 PIK3IP1Q96FE7 263 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 SLC25A44Q96H78 314 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 BOD1Q96IK1 185 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 TNFRSF13CQ96RJ3 184 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 YY1AP1Q9H869 796 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 GPR35Q9HC97 309 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 MOV10Q9HCE1 1003 aaKnown RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 OBP2BQ9NPH6 170 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 MED29Q9NX70 200 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 POFUT2Q9Y2G5 429 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 AMDHD2Q9Y303 409 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 MAGED1Q9Y5V3 778 aaPredicted RBP7.81□□□□□ -1.16
COL8A1-207ENST00000483969 MYO7BQ6PIF6 2116 aa7.81□□□□□ -1.16
COL8A1-207ENST00000483969 NCOA6Q14686 2063 aaPredicted RBP7.8□□□□□ -1.16
COL8A1-207ENST00000483969 TRBV4-1A0A0J9YWV2 114 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 SH3PXD2BA1X283 911 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 NPIPB13A6NJU9 1138 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 DEFB108AA8MXU0 73 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 CENPBD1B2RD01 187 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 NPIPB4C9JG80 1138 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 M0R3G1 203 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 TNFRSF11BO00300 401 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 EBAG9O00559 213 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 CLOCKO15516 846 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 PIP5K1CO60331 668 aa7.8□□□□□ -1.16
COL8A1-207ENST00000483969 OR10H3O60404 316 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms