RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PAPD5Q8NDF8 572 aaKnown RBP23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 FOXB1Q99853 325 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 KATNB1Q9BVA0 655 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 KRCC1Q9NPI7 259 aaPredicted RBP23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 ADAM18Q9Y3Q7 739 aa23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 MAGED1Q9Y5V3 778 aaPredicted RBP23.13■■□□□ 1.29
GTF3C4-202ENST00000483873 OR10H3O60404 316 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 PTP4A3O75365 173 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 CD53P19397 219 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 DNASE1P24855 282 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 FXYD6P3P58550 94 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 ERVK-25P63136 954 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 KEAP1Q14145 624 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 THSD4Q6ZMP0 1018 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 HDDC2Q7Z4H3 204 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 PIAS4Q8N2W9 510 aaPredicted RBP23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 CLDN22Q8N7P3 220 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 ZNF519Q8TB69 540 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 HTRA1Q92743 480 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 NINJ1Q92982 152 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 MCHR2Q969V1 340 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 DUS3LQ96G46 650 aaKnown RBP23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 IL20RAQ9UHF4 553 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 TMCC3Q9ULS5 477 aa23.12■■□□□ 1.29
GTF3C4-202ENST00000483873 UNC119BA6NIH7 251 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 SHISA9B4DS77 424 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 TNFRSF11BO00300 401 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 HS3ST1O14792 307 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 DHHO43323 396 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 PTAFRP25105 342 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 RPL4P36578 427 aaKnown RBP23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 ACVR1BP36896 505 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 TAF11Q15544 211 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 ZNF627Q7L945 461 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 OR4C15Q8NGM1 316 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 KCNK17Q96T54 332 aa23.11■■□□□ 1.29
GTF3C4-202ENST00000483873 KRT36O76013 467 aa23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 HOXB1P14653 301 aaPredicted RBP23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 HOXB6P17509 224 aaKnown RBP23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 CAPZA2P47755 286 aa23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 HMGA2P52926 109 aa23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 FMODQ06828 376 aa23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 C1QTNF12Q5T7M4 302 aa23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 OR9Q2Q8NGE9 314 aa23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 NMD3Q96D46 503 aaKnown RBP23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 SEC61A2Q9H9S3 476 aa23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 STX18Q9P2W9 335 aaKnown RBP23.1■■□□□ 1.29
GTF3C4-202ENST00000483873 IGKV1D-43A0A0B4J1Z2 117 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 IGHV1-18A0A0C4DH31 117 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 CENPBD1B2RD01 187 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 NDUFB2O95178 105 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 SLC2A10O95528 541 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 CD14P08571 375 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 CD47Q08722 323 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 ZNF672Q499Z4 452 aaPredicted RBP23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 OR2T5Q6IEZ7 315 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 PGBD2Q6P3X8 592 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 MYPOPQ86VE0 399 aaPredicted RBP23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 OR2T29Q8NH02 315 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 Q96M85 177 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 NOX3Q9HBY0 568 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 ZNF224Q9NZL3 707 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 U3KQV3 271 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 PLCE1Q9P212 2302 aa23.09■■□□□ 1.29
GTF3C4-202ENST00000483873 ENTPD5O75356 428 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 TIPRLO75663 272 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 HLA-HP01893 362 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 CELA3BP08861 270 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 CDH11P55287 796 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 FAM122BQ7Z309 247 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 MDP1Q86V88 176 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 ARIH2OSQ8N7S6 290 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 PYDC1Q8WXC3 89 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 SLC38A2Q96QD8 506 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 ARMC1Q9NVT9 282 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 TMEM38BQ9NVV0 291 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 CRNNQ9UBG3 495 aaPredicted RBP23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 EDARQ9UNE0 448 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 AP4S1Q9Y587 144 aa23.08■■□□□ 1.29
GTF3C4-202ENST00000483873 H7C1C5 153 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 RRP9O43818 475 aaKnown RBP23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 CST1P01037 141 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 FPR3P25089 353 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 GSSP48637 474 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 ZNF133P52736 654 aaPredicted RBP23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 LCN6P62502 163 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 C1orf94Q6P1W5 598 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 SLC22A25Q6T423 547 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 C20orf204Q6ZNR8 217 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 ZNF771Q7L3S4 317 aaPredicted RBP23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 ZNF611Q8N823 705 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 FANK1Q8TC84 345 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 YY1AP1Q9H869 796 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 B3GNT2Q9NY97 397 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 MGAT4BQ9UQ53 548 aa23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 SAMHD1Q9Y3Z3 626 aaKnown RBP23.08■■□□□ 1.28
GTF3C4-202ENST00000483873 CD79AP11912 226 aa23.07■■□□□ 1.28
GTF3C4-202ENST00000483873 IFNGR2P38484 337 aa23.07■■□□□ 1.28
GTF3C4-202ENST00000483873 ART1P52961 327 aa23.07■■□□□ 1.28
GTF3C4-202ENST00000483873 MESTQ5EB52 335 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms