RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 AP3M1Q9Y2T2 418 aa17.12■□□□□ 0.33
HPS4-213ENST00000483631 STAB1Q9NY15 2570 aa17.12■□□□□ 0.33
HPS4-213ENST00000483631 FBN1P35555 2871 aaKnown RBP17.11■□□□□ 0.33
HPS4-213ENST00000483631 IGHV4-61A0A0C4DH41 118 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 A0A1W2PRG6 482 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 NPIPB13A6NJU9 1138 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 NPIPB4C9JG80 1138 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 KPNA4O00629 521 aaPredicted RBP17.11■□□□□ 0.33
HPS4-213ENST00000483631 TACSTD2P09758 323 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 TSPAN19P0C672 248 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 UMPSP11172 480 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 ZNF16P17020 682 aaPredicted RBP17.11■□□□□ 0.33
HPS4-213ENST00000483631 ZNF133P52736 654 aaPredicted RBP17.11■□□□□ 0.33
HPS4-213ENST00000483631 GALK2Q01415 458 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 FXNQ16595 210 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 SKA3Q8IX90 412 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 HPS1Q92902 700 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 BEX2Q9BXY8 128 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 MRPL13Q9BYD1 178 aaKnown RBP17.11■□□□□ 0.33
HPS4-213ENST00000483631 BPESC1Q9GZL8 116 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 SHARPINQ9H0F6 387 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 RIMS3Q9UJD0 308 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 KCNS2Q9ULS6 477 aa17.11■□□□□ 0.33
HPS4-213ENST00000483631 SLC22A23A1A5C7 686 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 FAM220BPB1ANY3 271 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 M0R233 179 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 IGFBP1P08833 259 aaPredicted RBP17.1■□□□□ 0.33
HPS4-213ENST00000483631 FUT1P19526 365 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 DAP3P51398 398 aaKnown RBP17.1■□□□□ 0.33
HPS4-213ENST00000483631 RPL18Q07020 188 aaKnown RBP17.1■□□□□ 0.33
HPS4-213ENST00000483631 CARTPTQ16568 116 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 IQCCQ4KMZ1 466 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 CDK20Q8IZL9 346 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 UBASH3BQ8TF42 649 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 C10orf82Q8WW14 230 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 TMEM239Q8WW34 195 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 SGTBQ96EQ0 304 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 MRPL37Q9BZE1 423 aaKnown RBP17.1■□□□□ 0.33
HPS4-213ENST00000483631 CCDC134Q9H6E4 229 aa17.1■□□□□ 0.33
HPS4-213ENST00000483631 BLOC1S5-TXNDC5H3BN57 136 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 OR7A10O76100 309 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 PTHP01270 115 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 ADRA2AP08913 450 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 QDPRP09417 244 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 NR2C1P13056 603 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 KDELR2P33947 212 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 UGT2B15P54855 530 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 CLRN1P58418 232 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 MELKQ14680 651 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 RAB39AQ14964 217 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 SLC36A2Q495M3 483 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 GKAP1Q5VSY0 366 aaPredicted RBP17.09■□□□□ 0.33
HPS4-213ENST00000483631 CGB2Q6NT52 195 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 TMEM53Q6P2H8 277 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 UGT2A3Q6UWM9 527 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 DEF8Q6ZN54 512 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 ARPINQ7Z6K5 226 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 ZNF584Q8IVC4 421 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 NKAIN4Q8IVV8 208 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 MSI2Q96DH6 328 aaKnown RBP17.09■□□□□ 0.33
HPS4-213ENST00000483631 SMURF2Q9HAU4 748 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 MED31Q9Y3C7 131 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 CAPN7Q9Y6W3 813 aa17.09■□□□□ 0.33
HPS4-213ENST00000483631 LOC100289279A0A1B0GTE1 492 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 MCIDASD6RGH6 385 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 IFNA8P32881 189 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 ZNF84P51523 738 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 CHN2P52757 468 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 PIN1Q13526 163 aaPredicted RBP17.08■□□□□ 0.32
HPS4-213ENST00000483631 RIN1Q13671 783 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 TAF11Q15544 211 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 MSMPQ1L6U9 139 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 CYBRD1Q53TN4 286 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 C10orf128Q5T292 105 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 NOXO1Q8NFA2 376 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 OR2T12Q8NG77 320 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 TMEM255BQ8WV15 326 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 ASB10Q8WXI3 467 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 MCHR2Q969V1 340 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 INIPQ9NRY2 104 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 REV1Q9UBZ9 1251 aa17.08■□□□□ 0.32
HPS4-213ENST00000483631 ZNF346Q9UL40 294 aaKnown RBP17.08■□□□□ 0.32
HPS4-213ENST00000483631 SH3PXD2BA1X283 911 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 GMNCA6NCL1 334 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 SNAP29O95721 258 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 ACADSP16219 412 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 IGFBP5P24593 272 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 SELENOWP63302 87 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 ST3GAL3Q11203 375 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 MICU2Q8IYU8 434 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 ZCCHC24Q8N2G6 241 aaKnown RBP17.07■□□□□ 0.32
HPS4-213ENST00000483631 SLC30A7Q8NEW0 376 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 OR4K5Q8NGD3 323 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 OR1J2Q8NGS2 313 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 PFN4Q8NHR9 129 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 TMEM158Q8WZ71 300 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 LZICQ8WZA0 190 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 PRRC1Q96M27 445 aa17.07■□□□□ 0.32
HPS4-213ENST00000483631 LOC100653049A0A140TA62 436 aa17.06■□□□□ 0.32
HPS4-213ENST00000483631 ELOVL7A1L3X0 281 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms