RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 RHNO1Q9BSD3 238 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 CALHM2Q9HA72 323 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 PALMDQ9NP74 551 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 FAIMQ9NVQ4 179 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 CLCF1Q9UBD9 225 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 ITGB1BP2Q9UKP3 347 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 MED12LQ86YW9 2145 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 IGKV3D-15A0A087WSY6 115 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 FAM171A2A8MVW0 826 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 DCTN6O00399 190 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 PRODHO43272 600 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 IGHG1P01857 330 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 CRHBPP24387 322 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 PCSK6P29122 969 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 CDH11P55287 796 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 CLRN1P58418 232 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 RPS7P62081 194 aaKnown RBP13.35□□□□□ -0.27
PHGDH-205ENST00000482968 TEKQ02763 1124 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 ACSF3Q4G176 576 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-205ENST00000482968 RBM48Q5RL73 367 aaKnown RBP13.35□□□□□ -0.27
PHGDH-205ENST00000482968 MEPCEQ7L2J0 689 aaKnown RBP13.35□□□□□ -0.27
PHGDH-205ENST00000482968 AAED1Q7RTV5 226 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 HDDC2Q7Z4H3 204 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 OR6V1Q8N148 313 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 ZNRF4Q8WWF5 429 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 RFKQ969G6 155 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 OR2M2Q96R28 347 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 TEAD3Q99594 435 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 MRPL13Q9BYD1 178 aaKnown RBP13.35□□□□□ -0.27
PHGDH-205ENST00000482968 NMNAT2Q9BZQ4 307 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 NUAK2Q9H093 628 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 SCN3BQ9NY72 215 aa13.35□□□□□ -0.27
PHGDH-205ENST00000482968 VSX1Q9NZR4 365 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-205ENST00000482968 NOSIPQ9Y314 301 aaKnown RBP13.35□□□□□ -0.27
PHGDH-205ENST00000482968 SNTNA6NMZ2 147 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 GPR171O14626 319 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 SLC16A7O60669 478 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 ZNF432O94892 652 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 YES1P07947 543 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 CCDC159P0C7I6 412 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 PGA4P0DJD7 388 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 PGA3P0DJD8 388 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 FCGR2AP12318 317 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 GABRA1P14867 456 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 SPI1P17947 270 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 EEF1B2P24534 225 aaKnown RBP13.34□□□□□ -0.27
PHGDH-205ENST00000482968 CSNK2BP67870 215 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 SF3B4Q15427 424 aaKnown RBP eCLIP13.34□□□□□ -0.273e-8■■■■■ 37.6
PHGDH-205ENST00000482968 C3P1Q6ZMU1 363 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 GID4Q8IVV7 300 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 ZNF540Q8NDQ6 660 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 CPT1CQ8TCG5 803 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 RBP7Q96R05 134 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 RNF122Q9H9V4 155 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 BCO1Q9HAY6 547 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 PLCXD1Q9NUJ7 323 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 RHBDL2Q9NX52 303 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 EMC3Q9P0I2 261 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.34□□□□□ -0.27
PHGDH-205ENST00000482968 RPL36Q9Y3U8 105 aaKnown RBP13.34□□□□□ -0.27
PHGDH-205ENST00000482968 USP24Q9UPU5 2620 aa13.34□□□□□ -0.27
PHGDH-205ENST00000482968 FIGNL2A6NMB9 653 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 WDR1O75083 606 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 EDN3P14138 238 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 SLC2A5P22732 501 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 HTR1FP30939 366 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 PYCR1P32322 319 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 SLC25A1P53007 311 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 FMODQ06828 376 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 ETFDHQ16134 617 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-205ENST00000482968 NSUN5P2Q63ZY6 315 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.33□□□□□ -0.28
PHGDH-205ENST00000482968 CLVS1Q8IUQ0 354 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-205ENST00000482968 OR6N1Q8NGY5 312 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 OR2T4Q8NH00 348 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 SGCDQ92629 289 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 GGHQ92820 318 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 WNT2BQ93097 391 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 SNX18Q96RF0 628 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 B9D1Q9UPM9 204 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 TPRKBQ9Y3C4 175 aa13.33□□□□□ -0.28
PHGDH-205ENST00000482968 ZNF724A8MTY0 619 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 M0R3G1 203 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 PRRG2O14669 202 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 AKAP8O43823 692 aaKnown RBP13.32□□□□□ -0.28
PHGDH-205ENST00000482968 SLC19A2O60779 497 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 MRPL33O75394 65 aaKnown RBP13.32□□□□□ -0.28
PHGDH-205ENST00000482968 DBTP11182 482 aaKnown RBP13.32□□□□□ -0.28
PHGDH-205ENST00000482968 CTLA4P16410 223 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 MTNR1AP48039 350 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 CENPAP49450 140 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 ZNF91Q05481 1191 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 PIGFQ07326 219 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 LGALS3BPQ08380 585 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 RTL6Q6ICC9 239 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 Q6ZNX1 250 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 DOLPP1Q86YN1 238 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 GCNT2Q8N0V5 402 aa13.32□□□□□ -0.28
PHGDH-205ENST00000482968 TMEM123Q8N131 208 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms