RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 KCTD14Q9BQ13 255 aaPredicted RBP17.23■□□□□ 0.35
MSH5-215ENST00000482280 ELAC2Q9BQ52 826 aaKnown RBP17.23■□□□□ 0.35
MSH5-215ENST00000482280 NDEL1Q9GZM8 345 aa17.23■□□□□ 0.35
MSH5-215ENST00000482280 TMEM38BQ9NVV0 291 aa17.23■□□□□ 0.35
MSH5-215ENST00000482280 LOC390937A0A1W2PQ73 354 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 SH3PXD2BA1X283 911 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 GMNCA6NCL1 334 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 LY6HO94772 140 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 IFI30P13284 250 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 USF1P22415 310 aaPredicted RBP17.22■□□□□ 0.35
MSH5-215ENST00000482280 NR4A1P22736 598 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 GUCA1AP43080 201 aaPredicted RBP17.22■□□□□ 0.35
MSH5-215ENST00000482280 TRAM2Q15035 370 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 SLC16A14Q7RTX9 510 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 CPLX4Q7Z7G2 160 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 SKA3Q8IX90 412 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 ANKS4BQ8N8V4 417 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 SYT14Q8NB59 555 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 NOXO1Q8NFA2 376 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 BPIFA2Q96DR5 249 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 LRMDAQ9H2I8 198 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 C1orf198Q9H425 327 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 C20orf141Q9NUB4 165 aa17.22■□□□□ 0.35
MSH5-215ENST00000482280 NIPBLQ6KC79 2804 aaeCLIP17.21■□□□□ 0.35
MSH5-215ENST00000482280 IQCMA0A1B0GVH7 501 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 A8MV72 311 aaPredicted RBP17.21■□□□□ 0.35
MSH5-215ENST00000482280 MGRN1O60291 552 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 CRLF1O75462 422 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 ACADSP16219 412 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 ZNF14P17017 642 aaPredicted RBP17.21■□□□□ 0.35
MSH5-215ENST00000482280 YAP1P46937 504 aaKnown RBP17.21■□□□□ 0.35
MSH5-215ENST00000482280 SELENOVP59797 346 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 CD47Q08722 323 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 RAB39AQ14964 217 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 TAF11Q15544 211 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 IQCCQ4KMZ1 466 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 ALG10Q5BKT4 473 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 LRFN4Q6PJG9 635 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 HACD2Q6Y1H2 254 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 OR4K5Q8NGD3 323 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 NEU4Q8WWR8 484 aaPredicted RBP17.21■□□□□ 0.35
MSH5-215ENST00000482280 MCHR2Q969V1 340 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 CDH20Q9HBT6 801 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 SLC7A8Q9UHI5 535 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 RPS6KA6Q9UK32 745 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 FAM32AQ9Y421 112 aaKnown RBP17.21■□□□□ 0.35
MSH5-215ENST00000482280 HIVEP2P31629 2446 aa17.21■□□□□ 0.35
MSH5-215ENST00000482280 ZNF469Q96JG9 3925 aaPredicted RBP17.21■□□□□ 0.35
MSH5-215ENST00000482280 SLC22A23A1A5C7 686 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 NME4O00746 187 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 SERPINA1P01009 418 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 SERPINA5P05154 406 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 MYBPC1Q00872 1141 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 TOP3AQ13472 1001 aaPredicted RBP17.2■□□□□ 0.34
MSH5-215ENST00000482280 GGTLC2Q14390 218 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 TMEM249Q2WGJ8 235 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 NRN1LQ496H8 165 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 ZNF730Q6ZMV8 503 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 VTCN1Q7Z7D3 282 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 WDFY1Q8IWB7 410 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 OFCC1Q8IZS5 231 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 OR1J2Q8NGS2 313 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 FNDC8Q8TC99 324 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 LIPHQ8WWY8 451 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 ASB10Q8WXI3 467 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 ZNF347Q96SE7 839 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 SH3GL3Q99963 347 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 CCNB1IP1Q9NPC3 277 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 RHCGQ9UBD6 479 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 A4GNTQ9UNA3 340 aa17.2■□□□□ 0.34
MSH5-215ENST00000482280 M0R233 179 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 GPRIN2O60269 458 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 PIP5K1CO60331 668 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 TRMUO75648 421 aaKnown RBP17.19■□□□□ 0.34
MSH5-215ENST00000482280 GLRXP35754 106 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 GSK3BP49841 420 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 LSM11P83369 360 aaKnown RBP eCLIP17.19■□□□□ 0.34
MSH5-215ENST00000482280 HSF2Q03933 536 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 KRTAP1-1Q07627 177 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 TBC1D28Q2M2D7 210 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 ANKDD1AQ495B1 522 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 FAM205BPQ63HN1 556 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 CYB5R2Q6BCY4 276 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 CBLL1Q75N03 491 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 OAFQ86UD1 273 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 RNF113BQ8IZP6 322 aaKnown RBP17.19■□□□□ 0.34
MSH5-215ENST00000482280 RBM15BQ8NDT2 890 aaKnown RBP17.19■□□□□ 0.34
MSH5-215ENST00000482280 SLC30A7Q8NEW0 376 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 MOSPD2Q8NHP6 518 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 MRPL24Q96A35 216 aaKnown RBP17.19■□□□□ 0.34
MSH5-215ENST00000482280 HSH2DQ96JZ2 352 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 RBP7Q96R05 134 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 MS4A5Q9H3V2 200 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 SPAG4Q9NPE6 437 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 ADA2Q9NZK5 511 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 GPR160Q9UJ42 338 aa17.19■□□□□ 0.34
MSH5-215ENST00000482280 PLCE1Q9P212 2302 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 A0A1W2PPW3 197 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 NPIPB13A6NJU9 1138 aa17.18■□□□□ 0.34
MSH5-215ENST00000482280 EFCAB9A8MZ26 197 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms