RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 FCGR1BQ92637 280 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 GGHQ92820 318 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 TMEM80Q96HE8 168 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 TXNDC15Q96J42 360 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 COPS4Q9BT78 406 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 CDCA4Q9BXL8 241 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 MRPS26Q9BYN8 205 aaKnown RBP9.03□□□□□ -0.96
USP39-215ENST00000481409 SYT4Q9H2B2 425 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 MARCH7Q9H992 704 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 RPRD1BQ9NQG5 326 aaKnown RBP9.03□□□□□ -0.96
USP39-215ENST00000481409 MED29Q9NX70 200 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 GLTPQ9NZD2 209 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 DNAJC27Q9NZQ0 273 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 FOXD3Q9UJU5 478 aaPredicted RBP9.03□□□□□ -0.96
USP39-215ENST00000481409 DIMT1Q9UNQ2 313 aaKnown RBP9.03□□□□□ -0.96
USP39-215ENST00000481409 B9D1Q9UPM9 204 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 EXOSC1Q9Y3B2 195 aaKnown RBP9.03□□□□□ -0.96
USP39-215ENST00000481409 EMC9Q9Y3B6 208 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 SNX5Q9Y5X3 404 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 TMEM14AQ9Y6G1 99 aa9.03□□□□□ -0.96
USP39-215ENST00000481409 ANKRD11Q6UB99 2663 aaPredicted RBP9.03□□□□□ -0.96
USP39-215ENST00000481409 IGHV3-15A0A0B4J1V0 119 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 CCDC182A6NF36 153 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 FAM183AA6NL82 134 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 PTGES3LE9PB15 166 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 RPL36A-HNRNPH2H7BZ11 118 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 XPNPEP2O43895 674 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 SLC16A7O60669 478 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 RAMP1O60894 148 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 AQP8O94778 261 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 RPSAP08865 295 aaKnown RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 OR2T7P0C7T2 308 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 MYL12AP19105 171 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 NPR2P20594 1047 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 ATP6V1E1P36543 226 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 ZNF84P51523 738 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 MLLT10P55197 1068 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 RPS7P62081 194 aaKnown RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 SMN1Q16637 294 aaKnown RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 KLHL12Q53G59 568 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 TEX30Q5JUR7 227 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 C1QTNF12Q5T7M4 302 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 GFRALQ6UXV0 394 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 SHFQ7M4L6 423 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 GLB1L2Q8IW92 636 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 OR6V1Q8N148 313 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 CYB561A3Q8NBI2 242 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 ST6GALNAC3Q8NDV1 305 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 PROKR2Q8NFJ6 384 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 OR6N1Q8NGY5 312 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 OR2T27Q8NH04 317 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 ABHD3Q8WU67 409 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 KISS1RQ969F8 398 aaPredicted RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 OTULINQ96BN8 352 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 NMD3Q96D46 503 aaKnown RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 RNFT2Q96EX2 444 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 CRELD1Q96HD1 420 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 ZNF385AQ96PM9 386 aaKnown RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 SIGLEC11Q96RL6 698 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 TRIB1Q96RU8 372 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 CNN2Q99439 309 aaKnown RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 YIPF3Q9GZM5 350 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 NUAK2Q9H093 628 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 OR51V1Q9H2C8 321 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 CHCHD3Q9NX63 227 aaKnown RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 TNFRSF10DQ9UBN6 386 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 ING1Q9UK53 422 aaPredicted RBP9.02□□□□□ -0.97
USP39-215ENST00000481409 ZFHX4Q86UP3 3567 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 IGF2RP11717 2491 aa9.02□□□□□ -0.97
USP39-215ENST00000481409 LOC400499M0QZD8 3231 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 FRYQ5TBA9 3013 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 IGLV1-36A0A0B4J1U3 117 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 TTLL8A6PVC2 850 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 HSPB2A8KAH6 182 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 M0R129 80 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 TMCC2O75069 709 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 CLPTM1O96005 669 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 IL2RAP01589 272 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 IGHA1P01876 353 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 TPOP07202 933 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 SBK2P0C263 348 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 LAP3P28838 519 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 GSTT1P30711 240 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 CASP6P55212 293 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 ST3GAL4Q11206 333 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 CAMK2DQ13557 499 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 GUSBP1Q15486 140 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 TBCEQ15813 527 aaPredicted RBP9.01□□□□□ -0.97
USP39-215ENST00000481409 HSPB2Q16082 182 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 KCNMB1Q16558 191 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 C1orf185Q5T7R7 199 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 LINC01590Q5TEZ4 76 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 TMEM211Q6ICI0 200 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 SLC25A47Q6Q0C1 308 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 B3GNT6Q6ZMB0 384 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 FOXL2NBQ6ZUU3 175 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 AHSA2Q719I0 299 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 RHOUQ7L0Q8 258 aa9.01□□□□□ -0.97
USP39-215ENST00000481409 FAM214BQ7L5A3 538 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms