RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 PYCR1P32322 319 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 GRK5P34947 590 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ISL1P61371 349 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 KEAP1Q14145 624 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 PHYHD1Q5SRE7 291 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 KRT80Q6KB66 452 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 LYPD4Q6UWN0 246 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 NHLRC1Q6VVB1 395 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 CXXC5Q7LFL8 322 aaKnown RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 NPEPL1Q8NDH3 523 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 OR6K6Q8NGW6 343 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF519Q8TB69 540 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 SMAP2Q8WU79 429 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNRF4Q8WWF5 429 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ZNF837Q96EG3 531 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 SLC25A44Q96H78 314 aaPredicted RBP5.69□□□□□ -1.5
HERC4-210ENST00000480158 TM9SF2Q99805 663 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 SLC25A19Q9HC21 320 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 CMC2Q9NRP2 79 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 ASB6Q9NWX5 421 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 UBAP1Q9NZ09 502 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 EMC3Q9P0I2 261 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 PRSS50Q9UI38 385 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 RAB26Q9ULW5 256 aa5.69□□□□□ -1.5
HERC4-210ENST00000480158 GTF3C1Q12789 2109 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 ZGRF1Q86YA3 2104 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 LOC102725191A0A1B0GVB3 256 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 PRSS37A4D1T9 235 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 SH3D21A4FU49 640 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 CD8B2A6NJW9 211 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 GPR171O14626 319 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 LRRTM2O43300 516 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 ENTPD6O75354 484 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 IGHG1P01857 330 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 HLA-DQA2P01906 255 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 QDPRP09417 244 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 PGA4P0DJD7 388 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 PGA3P0DJD8 388 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 TMIGD3P0DMS9 266 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 CTLA4P16410 223 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 KIR2DL2P43627 348 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 FAPQ12884 760 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 MED21Q13503 144 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 POU4F3Q15319 338 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 SF3B4Q15427 424 aaKnown RBP eCLIP5.68□□□□□ -1.5
HERC4-210ENST00000480158 TSPO2Q5TGU0 170 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 GPR139Q6DWJ6 353 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 FAM214BQ7L5A3 538 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 BTLAQ7Z6A9 289 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 LUZP2Q86TE4 346 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 OR6V1Q8N148 313 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 PROKR2Q8NFJ6 384 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 BPIFB6Q8NFQ5 453 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 OR6X1Q8NH79 312 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 TMEM163Q8TC26 289 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 APH1AQ96BI3 265 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 GMPPAQ96IJ6 420 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 PITX2Q99697 317 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 RHNO1Q9BSD3 238 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 RBM24Q9BX46 236 aaKnown RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 ANKRD60Q9BZ19 345 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 Q9H521 79 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 SEC61A2Q9H9S3 476 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 BCO1Q9HAY6 547 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 CRLF2Q9HC73 371 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 FANCFQ9NPI8 374 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 H2AFY2Q9P0M6 372 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 BAIAP2Q9UQB8 552 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 IGKV3D-15A0A087WSY6 115 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 A0A0G2JNJ9 132 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 SLC22A23A1A5C7 686 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 MBD3L4A6NDZ8 208 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 MBD3L3A6NE82 208 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 TVP23AA6NH52 213 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 A6NIZ1 184 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 MBD3L5A6NJ08 208 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 VGLL3A8MV65 326 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 IDH3BO43837 385 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 XPNPEP2O43895 674 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 FZD7O75084 574 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 SLC43A1O75387 559 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 ZNF432O94892 652 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 MPZL1O95297 269 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 RENP00797 406 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 MRPL3P09001 348 aaKnown RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 APEHP13798 732 aaKnown RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 PAICSP22234 425 aaKnown RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 CDAP32320 146 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 RPS27P42677 84 aaKnown RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 CSNK1A1P48729 337 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 FOXG1P55316 489 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 RAP1BP61224 184 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 RAP1AP62834 184 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 RELBQ01201 579 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 CDK5R2Q13319 367 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 APOFQ13790 326 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 MAD2L1BPQ15013 274 aaPredicted RBP5.68□□□□□ -1.5
HERC4-210ENST00000480158 LRFN4Q6PJG9 635 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 USP51Q70EK9 711 aa5.68□□□□□ -1.5
HERC4-210ENST00000480158 SHFQ7M4L6 423 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms