RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 IER5LQ5T953 404 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 FAM111BQ6SJ93 734 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 C17orf99Q6UX52 265 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 COMTD1Q86VU5 262 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 LMX1AQ8TE12 382 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 INTS12Q96CB8 462 aaKnown RBP5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 C2orf50Q96LR7 162 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 RBM24Q9BX46 236 aaKnown RBP5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 TEX101Q9BY14 249 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC5A6Q9Y289 635 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 PUS1Q9Y606 427 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 SDK1Q7Z5N4 2213 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 SIGLEC6O43699 453 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 BLVRBP30043 206 aaPredicted RBP5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 NKX2-1P43699 371 aaPredicted RBP5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 PPICP45877 212 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 PFN3P60673 137 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 DOC2BQ14184 412 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 FXNQ16595 210 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 C18orf21Q32NC0 220 aaPredicted RBP5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 TOR2AQ5JU69 321 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 MARCH8Q5T0T0 291 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 PIP5KL1Q5T9C9 394 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 EEF1A1P5Q5VTE0 462 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 TRILQ7L0X0 811 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 PHOSPHO2Q8TCD6 241 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 PSMF1Q92530 271 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 LINC00615Q96LM1 132 aaPredicted RBP5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 EDEM2Q9BV94 578 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 NKX2-4Q9H2Z4 354 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 OPA3Q9H6K4 179 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 ACOXLQ9NUZ1 547 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 TMEFF2Q9UIK5 374 aaPredicted RBP5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 NALCNQ8IZF0 1738 aa5.67□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF705GA8MUZ8 300 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 CST4P01036 141 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PDGFBP01127 241 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PRSS56P0CW18 603 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PSMB10P40306 273 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 POU3F1Q03052 451 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF239Q16600 458 aaKnown RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 RAET1LQ5VY80 246 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 TBPL2Q6SJ96 375 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 OR52H1Q8NGJ2 320 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 FAM213BQ8TBF2 198 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PP6455Q8WZ26 134 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 DAZAP1Q96EP5 407 aaKnown RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PEX11GQ96HA9 241 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 VN1R3Q9BXE9 311 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 TTTY10Q9BZA0 68 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ZBTB42B2RXF5 422 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PIK3C2AO00443 1686 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 XRCC3O43542 346 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC10A3P09131 477 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 SMIM6P0DI80 62 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ABCD3P28288 659 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 CALCRP30988 508 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PNRC1Q12796 327 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ELAVL1Q15717 326 aaKnown RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ARHGAP11BQ3KRB8 267 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 LSRQ86X29 649 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 TIAM2Q8IVF5 1701 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 HSD17B11Q8NBQ5 300 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 HPSE2Q8WWQ2 592 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 HAS2Q92819 552 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PIK3IP1Q96FE7 263 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 TECTBQ96PL2 329 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ADOQ96SZ5 270 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 TMPRSS13Q9BYE2 586 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF586Q9NXT0 402 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 HAO2Q9NYQ3 351 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 DAPP1Q9UN19 280 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 OR5H14A6NHG9 310 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF587BE7ETH6 402 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 OR7C1O76099 320 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 IGLV3-27P01718 113 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 SDHBP21912 280 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 GSK3AP49840 483 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC25A1P53007 311 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 HTRA4P83105 476 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 DHODHQ02127 395 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 TMEM128Q5BJH2 165 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 MORN1Q5T089 497 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 XAF1Q6GPH4 301 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 COX15Q7KZN9 410 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 EXD3Q8N9H8 876 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 GATSQ8NAP1 163 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 OR52I2Q8NH67 350 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 SLC39A7Q92504 469 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 WDR34Q96EX3 536 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 LDAHQ9H6V9 325 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 PLAGL1Q9UM63 463 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 TRAPPC6AO75865 159 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 SERPINA7P05543 415 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 MAKP20794 623 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 CAV3P56539 151 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 MAP4K2Q12851 820 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ACOT6Q3I5F7 207 aaPredicted RBP5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 GLYATL3Q5SZD4 288 aa5.66□□□□□ -1.5
PRPF4B-205ENST00000480058 ZNF684Q5T5D7 378 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms