RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 WDR1O75083 606 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 GCM2O75603 506 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 SERPINI2O75830 405 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 GABARAPO95166 117 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 TGM6O95932 706 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 APOA1P02647 267 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 HOXD4P09016 255 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 TFPIP10646 304 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 PTGER4P35408 488 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 OPRL1P41146 370 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 HAAOP46952 286 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 AGFG1P52594 562 aaKnown RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 TAS2R41P59536 307 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 OR1Q1Q15612 314 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 SGCBQ16585 318 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 NRF1Q16656 503 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 TBRG1Q3YBR2 411 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 SLC36A3Q495N2 470 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ZFP69Q49AA0 526 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 FAM98BQ52LJ0 330 aaKnown RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 SLC25A53Q5H9E4 307 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ALG10BQ5I7T1 473 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ENTPD8Q5MY95 495 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 C6orf52Q5T4I8 152 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 RSBN1Q5VWQ0 802 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 LCN8Q6JVE9 175 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF613Q6PF04 617 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ULK3Q6PHR2 472 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 FIP1L1Q6UN15 594 aaKnown RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 C5orf46Q6UWT4 87 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF782Q6ZMW2 699 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 DEF8Q6ZN54 512 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF704Q6ZNC4 412 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 USP51Q70EK9 711 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 P4HA3Q7Z4N8 544 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ADCK1Q86TW2 530 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 TCTE3Q8IZS6 198 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 KLHL36Q8N4N3 616 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 GPR32P1Q8NGA4 272 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 OR6Q1Q8NGQ2 317 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 RHOXF1Q8NHV9 184 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 RPL3LQ92901 407 aaKnown RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 MIB2Q96AX9 1013 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 TMIGD2Q96BF3 282 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 SGK3Q96BR1 496 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 ZHX1-C8orf76Q96EF9 292 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 PYURFQ96I23 114 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 BARD1Q99728 777 aaKnown RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 DCUN1D5Q9BTE7 237 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 CENPOQ9BU64 300 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 C9orf16Q9BUW7 83 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 CCDC32Q9BV29 185 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 FNDC11Q9BVV2 318 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 PCDHAC1Q9H158 963 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 OR10A2Q9H208 303 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 PPA2Q9H2U2 334 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 MAGIXQ9H6Y5 334 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 BCO1Q9HAY6 547 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 KRCC1Q9NPI7 259 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-209ENST00000479532 PTTG3PQ9NZH4 202 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 CHRNA9Q9UGM1 479 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 SLC6A5Q9Y345 797 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 TMED7Q9Y3B3 224 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 LIPGQ9Y5X9 500 aa5.54□□□□□ -1.52
SF3B1-209ENST00000479532 DSPP15924 2871 aaKnown RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 HEATR5AQ86XA9 2040 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 FREM3P0C091 2139 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 KMT2BQ9UMN6 2715 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TRGV8A0A0C4DH27 118 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 A0A1B0GUH1 482 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TCRBV3S1A0A5B6 114 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TRAPPC13A5PLN9 417 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 AQP12BA6NM10 295 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CPSF4LA6NMK7 179 aaKnown RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 AHRRA9YTQ3 701 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CCRL2O00421 344 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TOR1AO14656 332 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ACOT8O14734 319 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 SEC14L5O43304 696 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF208O43345 1280 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CHP2O43745 196 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 NOS1APO75052 506 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 BCAS1O75363 584 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CCNKO75909 580 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 C1QL1O75973 258 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TOX4O94842 621 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 SYNGR4O95473 234 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 FABP3P05413 133 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 THRBP10828 461 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 UMPSP11172 480 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 FCGR2AP12318 317 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 CPN1P15169 458 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 GTF2E2P29084 291 aaKnown RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 TACR3P29371 465 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 SFTPDP35247 375 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 MSX2P35548 267 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 ACAA2P42765 397 aaKnown RBP5.53□□□□□ -1.52
SF3B1-209ENST00000479532 KIR2DL3P43628 341 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 OR1E2P47887 323 aa5.53□□□□□ -1.52
SF3B1-209ENST00000479532 DLX5P56178 289 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms