RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CELA2BP08218 269 aaPredicted RBP13□□□□□ -0.33
NPHP4-208ENST00000478423 DIO1P49895 249 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 EMDP50402 254 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 CYCSP99999 105 aaKnown RBP13□□□□□ -0.33
NPHP4-208ENST00000478423 UBE2NLQ5JXB2 153 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 GLYATL3Q5SZD4 288 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 FOXB2Q5VYV0 432 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 LCN10Q6JVE6 187 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 C6orf15Q6UXA7 325 aaPredicted RBP13□□□□□ -0.33
NPHP4-208ENST00000478423 PLPP7Q8NBV4 271 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 OR5L1Q8NGL2 311 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 MIB2Q96AX9 1013 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 AIFM2Q9BRQ8 373 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 SELENOIQ9C0D9 397 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 SIAEQ9HAT2 523 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 A4GNTQ9UNA3 340 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 SCN3AQ9NY46 2000 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 OR2J2O76002 312 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 SRMP19623 302 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 EVI2BP34910 448 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 HSF1Q00613 529 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 HACD4Q5VWC8 232 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 LYPD4Q6UWN0 246 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 MAFAQ8NHW3 353 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-208ENST00000478423 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-208ENST00000478423 ZMAT3Q9HA38 289 aaKnown RBP12.99□□□□□ -0.33
NPHP4-208ENST00000478423 CTSFQ9UBX1 484 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 MUTYHQ9UIF7 546 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 OR52A1Q9UKL2 312 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF346Q9UL40 294 aaKnown RBP12.99□□□□□ -0.33
NPHP4-208ENST00000478423 F5H5P2 479 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 M0R036 132 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 ABHD16AO95870 558 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 ATP1B1P05026 303 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 TGFBR1P36897 503 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 HTR2BP41595 481 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 KIR2DL1P43626 348 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-208ENST00000478423 STEAP2Q8NFT2 490 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 OR56B4Q8NH76 319 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 STOML3Q8TAV4 291 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 SCGB1C1Q8TD33 95 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 SLC19A3Q9BZV2 496 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 FKRPQ9H9S5 495 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 SLC25A19Q9HC21 320 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 GPATCH2Q9NW75 528 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 MRPS2Q9Y399 296 aaKnown RBP12.99□□□□□ -0.33
NPHP4-208ENST00000478423 A0A0A6YYH2 397 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 IGHV1OR15-9A0A0B4J2B8 117 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 A6NJ64 397 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 IGHV3-9P01782 118 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 FCGR2AP12318 317 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 ABOP16442 354 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 PSMB1P20618 241 aaKnown RBP12.99□□□□□ -0.33
NPHP4-208ENST00000478423 CMTM1Q8IZ96 169 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 SMAP2Q8WU79 429 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-208ENST00000478423 HSD17B8Q92506 261 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 CCDC74BQ96LY2 380 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 HINT2Q9BX68 163 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 LIN7BQ9HAP6 207 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 DNAJB11Q9UBS4 358 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 NUP50Q9UKX7 468 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 RTTNQ86VV8 2226 aa12.99□□□□□ -0.33
NPHP4-208ENST00000478423 PRAMEF4O60810 478 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 GAAP10253 952 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 PPP1CAP62136 330 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 MPEG1Q2M385 716 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 PRAMEF9Q5VWM5 478 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 OR2L13Q8N349 312 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 GPR32P1Q8NGA4 272 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 PCDHGA1Q9Y5H4 931 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 SERTM1A2A2V5 107 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 FAM166BA8MTA8 275 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 KLRC4-KLRK1H3BQV0 150 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 ALDOBP05062 364 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 UBCP0CG48 685 aaKnown RBP12.98□□□□□ -0.33
NPHP4-208ENST00000478423 IL32P24001 234 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 MECP2P51608 486 aaKnown RBP12.98□□□□□ -0.33
NPHP4-208ENST00000478423 CCL11P51671 97 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 EXOSC6Q5RKV6 272 aaKnown RBP12.98□□□□□ -0.33
NPHP4-208ENST00000478423 CCDC71LQ8N9Z2 235 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 IL1F10Q8WWZ1 152 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF486Q96H40 463 aaPredicted RBP12.98□□□□□ -0.33
NPHP4-208ENST00000478423 FAM60AQ9NP50 221 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 CHST11Q9NPF2 352 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 MLXQ9UH92 298 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 MYOFQ9NZM1 2061 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 SCN10AQ9Y5Y9 1956 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 B4DXG7 233 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 ADH6P28332 368 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 EFNA3P52797 238 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 PCBP4P57723 403 aaKnown RBP12.98□□□□□ -0.33
NPHP4-208ENST00000478423 TMEM178AQ8NBL3 297 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 GJC3Q8NFK1 279 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 OR4M1Q8NGD0 313 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 PPP1R35Q8TAP8 253 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 DCLRE1CQ96SD1 692 aaKnown RBP12.98□□□□□ -0.33
NPHP4-208ENST00000478423 PLA2G12AQ9BZM1 189 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 MFFQ9GZY8 342 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 ARRDC1-AS1Q9H2J1 176 aa12.98□□□□□ -0.33
NPHP4-208ENST00000478423 MED29Q9NX70 200 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms