RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ARIH2OSQ8N7S6 290 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 RDH5Q92781 318 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 TMEM54Q969K7 222 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 ZNF416Q9BWM5 594 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 MRPL37Q9BZE1 423 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 RNF121Q9H920 327 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 VIPAS39Q9H9C1 493 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 NPHS2Q9NP85 383 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 IQCMA0A1B0GVH7 501 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 TMEM129A0AVI4 362 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 LRP5LA4QPB2 252 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 BBIP1A8MTZ0 92 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 B4DSR2 109 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 LRRN3E7EW58 273 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 NPPAP01160 153 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 IGF2P01344 180 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 TFP02787 698 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 TROVE2P10155 538 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 GPR6P46095 362 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 CDH15P55291 814 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 TAS2R41P59536 307 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 RIN1Q13671 783 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 RAB39AQ14964 217 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 FXNQ16595 210 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 TBC1D28Q2M2D7 210 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 PCGF3Q3KNV8 242 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 COQ5Q5HYK3 327 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 RGS7BPQ6MZT1 257 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 SLC16A14Q7RTX9 510 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 GLCCI1Q86VQ1 547 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 RFLNBQ8N5W9 214 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 SLC30A7Q8NEW0 376 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 GPR32P1Q8NGA4 272 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 OR8J3Q8NGG0 315 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 OR10A6Q8NH74 314 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 ECSITQ9BQ95 431 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 SYT3Q9BQG1 590 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 ZNF426Q9BUY5 554 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 RSPO3Q9BXY4 272 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 BCL2L14Q9BZR8 327 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 SLCO1C1Q9NYB5 712 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 DUSP13Q9UII6 198 aa12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-209ENST00000478349 ALPK2Q86TB3 2170 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 HTR3EA5X5Y0 456 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 BLOC1S5-TXNDC5H3BN57 136 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 EDF1O60869 148 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 LILRA1O75019 489 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 SNAP29O95721 258 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 ASAH2BP0C7U1 165 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 PGA4P0DJD7 388 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 PGA3P0DJD8 388 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 RAD52P43351 418 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 DVL1P1P54792 670 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 TMEM33P57088 247 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 KLF3P57682 345 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 TEKQ02763 1124 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 TMEM154Q6P9G4 183 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 NHLRC1Q6VVB1 395 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 IL17RELQ6ZVW7 336 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 CCDC80Q76M96 950 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 RETREG3Q86VR2 466 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 ZCCHC24Q8N2G6 241 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 NOXO1Q8NFA2 376 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 C11orf40Q8WZ69 217 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 TAMM41Q96BW9 452 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 TAS2R5Q9NYW4 299 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 SH3GLB1Q9Y371 365 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 GRIP1Q9Y3R0 1128 aa12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 HEATR1Q9H583 2144 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-209ENST00000478349 TCF21O43680 179 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 OR5F1O95221 314 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 MT-ND1P03886 318 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 QDPRP09417 244 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 SAGP10523 405 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 THRBP10828 461 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 APLNRP35414 380 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 GUCA1AP43080 201 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 ALDH3B1P43353 468 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 HSF2Q03933 536 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 MELKQ14680 651 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 SHQ1Q6PI26 577 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 WDR88Q6ZMY6 472 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 SKA3Q8IX90 412 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 PCYOX1LQ8NBM8 494 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 RBM15BQ8NDT2 890 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 OR4K5Q8NGD3 323 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 FNDC8Q8TC99 324 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 SGTBQ96EQ0 304 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 THOC1Q96FV9 657 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 C1orf159Q96HA4 380 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 ZNF75AQ96N20 296 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 WFDC6Q9BQY6 131 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 C19orf24Q9BVV8 132 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 SMURF2Q9HAU4 748 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 CCNB1IP1Q9NPC3 277 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 INIPQ9NRY2 104 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 ZNF224Q9NZL3 707 aa12.42□□□□□ -0.42
SMARCE1-209ENST00000478349 NPIPB13A6NJU9 1138 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms