RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 SKA3Q8IX90 412 aa13.58□□□□□ -0.24
CLDN11-204ENST00000477531 SLC22A24Q8N4F4 322 aa13.58□□□□□ -0.24
CLDN11-204ENST00000477531 TPD52L3Q96J77 140 aa13.58□□□□□ -0.24
CLDN11-204ENST00000477531 BEX2Q9BXY8 128 aa13.58□□□□□ -0.24
CLDN11-204ENST00000477531 MEPEQ9NQ76 525 aaPredicted RBP13.58□□□□□ -0.24
CLDN11-204ENST00000477531 INIPQ9NRY2 104 aa13.58□□□□□ -0.24
CLDN11-204ENST00000477531 TMEM38BQ9NVV0 291 aa13.58□□□□□ -0.24
CLDN11-204ENST00000477531 LPAR3Q9UBY5 353 aa13.58□□□□□ -0.24
CLDN11-204ENST00000477531 TMEM129A0AVI4 362 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 ELOVL7A1L3X0 281 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 CENPBD1B2RD01 187 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 VWC2LB2RUY7 222 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 LMX1BO60663 402 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 PTHP01270 115 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 SERPINA5P05154 406 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 ADRA2AP08913 450 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 PGA4P0DJD7 388 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 PGA3P0DJD8 388 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 IGHV4-31P0DP07 118 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 ZNF35P13682 527 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 OR1E2P47887 323 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 UGT2B15P54855 530 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 GUCY1A3Q02108 690 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 ST3GAL3Q11203 375 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 SLC36A2Q495M3 483 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 CGB2Q6NT52 195 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 LRFN4Q6PJG9 635 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 NKAIN4Q8IVV8 208 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 MICU2Q8IYU8 434 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 PFN4Q8NHR9 129 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 TMEM255BQ8WV15 326 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 MRPL24Q96A35 216 aaKnown RBP13.57□□□□□ -0.24
CLDN11-204ENST00000477531 KCNN2Q9H2S1 579 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 MS4A5Q9H3V2 200 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 C1orf198Q9H425 327 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 TMEM160Q9NX00 188 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 ZNF224Q9NZL3 707 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 SLC7A8Q9UHI5 535 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 KCNS2Q9ULS6 477 aa13.57□□□□□ -0.24
CLDN11-204ENST00000477531 SLC22A23A1A5C7 686 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 HTR3EA5X5Y0 456 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 M0R233 179 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 SYNGR3O43761 229 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 MGRN1O60291 552 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 CCDC22O60826 627 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 STAMBPO95630 424 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 F13BP05160 661 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 PATE4P0C8F1 98 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 FAM157CP0CG43 387 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 NR2C1P13056 603 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 ZNF16P17020 682 aaPredicted RBP13.56□□□□□ -0.24
CLDN11-204ENST00000477531 SELENOVP59797 346 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 PLP2Q04941 152 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 RPL18Q07020 188 aaKnown RBP13.56□□□□□ -0.24
CLDN11-204ENST00000477531 FAM166AQ6J272 317 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 SLC16A14Q7RTX9 510 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 CDK20Q8IZL9 346 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 ZCCHC24Q8N2G6 241 aaKnown RBP13.56□□□□□ -0.24
CLDN11-204ENST00000477531 SYT14Q8NB59 555 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 RP9Q8TA86 221 aaKnown RBP13.56□□□□□ -0.24
CLDN11-204ENST00000477531 UBASH3BQ8TF42 649 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 MCHR2Q969V1 340 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 RCN3Q96D15 328 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 ZNF75AQ96N20 296 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 MDFIQ99750 246 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 SH3GL3Q99963 347 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 BPESC1Q9GZL8 116 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 SHARPINQ9H0F6 387 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 CDH20Q9HBT6 801 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 MED4Q9NPJ6 270 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 REV1Q9UBZ9 1251 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 ATRQ13535 2644 aa13.56□□□□□ -0.24
CLDN11-204ENST00000477531 IGHV4-61A0A0C4DH41 118 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 LOC100289279A0A1B0GTE1 492 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 IQCMA0A1B0GVH7 501 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 GSTA4O15217 222 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 ACADSP16219 412 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 ZNF23P17027 643 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 AQP2P41181 271 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 SELENOWP63302 87 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 NRN1LQ496H8 165 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 CXXC5Q7LFL8 322 aaKnown RBP13.55□□□□□ -0.24
CLDN11-204ENST00000477531 POU5F2Q8N7G0 328 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 SLC30A7Q8NEW0 376 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 NOXO1Q8NFA2 376 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 OR4K5Q8NGD3 323 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 OR1J2Q8NGS2 313 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 ASB10Q8WXI3 467 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 PRRC1Q96M27 445 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 ZNF347Q96SE7 839 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 MRPL37Q9BZE1 423 aaKnown RBP13.55□□□□□ -0.24
CLDN11-204ENST00000477531 C20orf141Q9NUB4 165 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 ARMCX1Q9P291 453 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 DUSP13Q9UII6 198 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 GPR160Q9UJ42 338 aa13.55□□□□□ -0.24
CLDN11-204ENST00000477531 ZNF346Q9UL40 294 aaKnown RBP13.55□□□□□ -0.24
CLDN11-204ENST00000477531 GMNCA6NCL1 334 aa13.54□□□□□ -0.24
CLDN11-204ENST00000477531 TRMUO75648 421 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms