RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SLC25A44Q96H78 314 aaPredicted RBP25.68■■□□□ 1.7
VEGFA-211ENST00000476772 COG8Q96MW5 612 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 ZNF385AQ96PM9 386 aaKnown RBP25.68■■□□□ 1.7
VEGFA-211ENST00000476772 SF3B5Q9BWJ5 86 aaKnown RBP25.68■■□□□ 1.7
VEGFA-211ENST00000476772 MRPL13Q9BYD1 178 aaKnown RBP25.68■■□□□ 1.7
VEGFA-211ENST00000476772 C1QTNF9BB2RNN3 333 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 IGHG3P01860 377 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 C1QTNF9P0C862 333 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 HSMCR30P0CW71 290 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 PGA4P0DJD7 388 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 PGA3P0DJD8 388 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 RPS3AP61247 264 aaKnown RBP25.68■■□□□ 1.7
VEGFA-211ENST00000476772 SPHARQ15513 63 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 NOXO1Q8NFA2 376 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 TAAR6Q96RI8 345 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 TIMP4Q99727 224 aa25.68■■□□□ 1.7
VEGFA-211ENST00000476772 DNAJC13O75165 2243 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 DAPL1A0PJW8 107 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 TVP23AA6NH52 213 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 ZNF726A6NNF4 738 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 AHCYL1O43865 530 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 IGHG1P01857 330 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 CRABP1P29762 137 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 HCCSP53701 268 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 WNT4P56705 351 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 CLRN1P58418 232 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 CARD17Q5XLA6 110 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 SLC35F2Q8IXU6 374 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 ADAD1Q96M93 576 aaKnown RBP25.67■■□□□ 1.7
VEGFA-211ENST00000476772 FOXN4Q96NZ1 517 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 MGLLQ99685 303 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 RACGAP1Q9H0H5 632 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 INPP5EQ9NRR6 644 aa25.67■■□□□ 1.7
VEGFA-211ENST00000476772 IGKV1D-43A0A0B4J1Z2 117 aa25.66■■□□□ 1.7
VEGFA-211ENST00000476772 ZNF716A6NP11 495 aa25.66■■□□□ 1.7
VEGFA-211ENST00000476772 ACTC1P68032 377 aa25.66■■□□□ 1.7
VEGFA-211ENST00000476772 ACTA1P68133 377 aa25.66■■□□□ 1.7
VEGFA-211ENST00000476772 ARMCX4Q5H9R4 360 aa25.66■■□□□ 1.7
VEGFA-211ENST00000476772 FCRLAQ7L513 359 aa25.66■■□□□ 1.7
VEGFA-211ENST00000476772 DGCR14Q96DF8 476 aaKnown RBP25.66■■□□□ 1.7
VEGFA-211ENST00000476772 ALG8Q9BVK2 526 aa25.66■■□□□ 1.7
VEGFA-211ENST00000476772 NAA50Q9GZZ1 169 aaKnown RBP25.66■■□□□ 1.7
VEGFA-211ENST00000476772 TP53TG5Q9Y2B4 290 aa25.66■■□□□ 1.7
VEGFA-211ENST00000476772 A0A1W2PQL4 384 aaPredicted RBP25.65■■□□□ 1.7
VEGFA-211ENST00000476772 LIPAP38571 399 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 CENPAP49450 140 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 CXADRP78310 365 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 ZNF85Q03923 595 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 DNM1P34Q6PK57 102 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 ERI1Q8IV48 349 aaKnown RBP25.65■■□□□ 1.7
VEGFA-211ENST00000476772 TIGD4Q8IY51 512 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 KLHL36Q8N4N3 616 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 RFLNBQ8N5W9 214 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 ZIC4Q8N9L1 334 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 YIPF6Q96EC8 236 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 WDYHV1Q96HA8 205 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 FUNDC2Q9BWH2 189 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 B3GNT3Q9Y2A9 372 aa25.65■■□□□ 1.7
VEGFA-211ENST00000476772 TAF4O00268 1085 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 CYTIPO60759 359 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 WISP2O76076 250 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 OR2T7P0C7T2 308 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 GALEQ14376 348 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 OR2T27Q8NH04 317 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 GATAD2BQ8WXI9 593 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 OPALINQ96PE5 141 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 RBP7Q96R05 134 aa25.64■■□□□ 1.7
VEGFA-211ENST00000476772 COA3Q9Y2R0 106 aaPredicted RBP25.64■■□□□ 1.7
VEGFA-211ENST00000476772 TGFBR2P37173 567 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 PLXDC2Q6UX71 529 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 SSX6Q7RTT6 188 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 SLC16A9Q7RTY1 509 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 ZNF485Q8NCK3 441 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 OR52N1Q8NH53 320 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 NMD3Q96D46 503 aaKnown RBP25.64■■□□□ 1.69
VEGFA-211ENST00000476772 WDR76Q9H967 626 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 PAQR5Q9NXK6 330 aaPredicted RBP25.64■■□□□ 1.69
VEGFA-211ENST00000476772 RSL24D1Q9UHA3 163 aaKnown RBP25.64■■□□□ 1.69
VEGFA-211ENST00000476772 COPS3Q9UNS2 423 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 LHX6Q9UPM6 363 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 FLVCR1Q9Y5Y0 555 aa25.64■■□□□ 1.69
VEGFA-211ENST00000476772 MGAQ8IWI9 3026 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 SYNGR4O95473 234 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 HLA-DQA2P01906 255 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 CPN1P15169 458 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 RASGEF1BQ0VAM2 473 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 ZNF322Q6U7Q0 402 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-211ENST00000476772 SIAH3Q8IW03 269 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 ABHD3Q8WU67 409 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 SPRYD4Q8WW59 207 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-211ENST00000476772 ZNF775Q96BV0 537 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-211ENST00000476772 OR2M2Q96R28 347 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 TTTY10Q9BZA0 68 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 MARCH7Q9H992 704 aa25.63■■□□□ 1.69
VEGFA-211ENST00000476772 CAB39Q9Y376 341 aaPredicted RBP25.63■■□□□ 1.69
VEGFA-211ENST00000476772 A0A087WV48 116 aa25.62■■□□□ 1.69
VEGFA-211ENST00000476772 TSTQ16762 297 aaKnown RBP25.62■■□□□ 1.69
VEGFA-211ENST00000476772 PLEKHN1Q494U1 663 aaPredicted RBP25.62■■□□□ 1.69
VEGFA-211ENST00000476772 THEM4Q5T1C6 240 aa25.62■■□□□ 1.69
VEGFA-211ENST00000476772 OTPQ5XKR4 325 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms