RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 RPL18Q07020 188 aaKnown RBP9.31□□□□□ -0.92
SEC13-214ENST00000476597 RAB39AQ14964 217 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 MSMPQ1L6U9 139 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 CHRFAM7AQ494W8 412 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 ZNF584Q8IVC4 421 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 MICU2Q8IYU8 434 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 CDK20Q8IZL9 346 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 ZNF540Q8NDQ6 660 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 OR2T12Q8NG77 320 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 RP9Q8TA86 221 aaKnown RBP9.31□□□□□ -0.92
SEC13-214ENST00000476597 MCHR2Q969V1 340 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 MRPL24Q96A35 216 aaKnown RBP9.31□□□□□ -0.92
SEC13-214ENST00000476597 SGTBQ96EQ0 304 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 MRPL37Q9BZE1 423 aaKnown RBP9.31□□□□□ -0.92
SEC13-214ENST00000476597 INIPQ9NRY2 104 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 C20orf141Q9NUB4 165 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 TMEM38BQ9NVV0 291 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 ARMCX1Q9P291 453 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 FBXL3Q9UKT7 428 aa9.31□□□□□ -0.92
SEC13-214ENST00000476597 ARFGEF3Q5TH69 2177 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 IGHV4-61A0A0C4DH41 118 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 A0A1W2PRG6 482 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 ELOVL7A1L3X0 281 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 MGRN1O60291 552 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 ENTPD5O75356 428 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 IGHG1P01857 330 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 ADRA2AP08913 450 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 DAOP14920 347 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 GIFP27352 417 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 ZNF133P52736 654 aaPredicted RBP9.3□□□□□ -0.92
SEC13-214ENST00000476597 ST3GAL3Q11203 375 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 GGTLC2Q14390 218 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 LAPTM4AQ15012 233 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 CARTPTQ16568 116 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 FXNQ16595 210 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 NRN1LQ496H8 165 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 LRRC23Q53EV4 343 aaPredicted RBP9.3□□□□□ -0.92
SEC13-214ENST00000476597 ARMC4Q5T2S8 1044 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 PODNL1Q6PEZ8 512 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 DPPA2Q7Z7J5 298 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 SLC15A3Q8IY34 581 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 ZNF786Q8N393 782 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 POU5F2Q8N7G0 328 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 ASB10Q8WXI3 467 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 RCN3Q96D15 328 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 ZNF347Q96SE7 839 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 SH3GL3Q99963 347 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 A4GNTQ9UNA3 340 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 AP3M1Q9Y2T2 418 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 MED31Q9Y3C7 131 aa9.3□□□□□ -0.92
SEC13-214ENST00000476597 CR1P17927 2039 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 FBN3Q75N90 2809 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 HTR3EA5X5Y0 456 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 NPIPB13A6NJU9 1138 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 NPIPB4C9JG80 1138 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 SYNGR3O43761 229 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 LMX1BO60663 402 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 TRMUO75648 421 aaKnown RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 FARS2O95363 451 aaKnown RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 IFNA2P01563 188 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 ERCC1P07992 297 aaPredicted RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 COX4I1P13073 169 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 APEHP13798 732 aaKnown RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 ACADSP16219 412 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 ZNF23P17027 643 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 MDH1P40925 334 aaKnown RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 DAP3P51398 398 aaKnown RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 CLRN1P58418 232 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 GALK2Q01415 458 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 IQCCQ4KMZ1 466 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 HSP90B2PQ58FF3 399 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 C10orf128Q5T292 105 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 GKAP1Q5VSY0 366 aaPredicted RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 ARPINQ7Z6K5 226 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 LRP11Q86VZ4 500 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 OR4K5Q8NGD3 323 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 MOSPD2Q8NHP6 518 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 MSI2Q96DH6 328 aaKnown RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 TPD52L3Q96J77 140 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 HOPXQ9BPY8 73 aaPredicted RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 BPESC1Q9GZL8 116 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 MS4A5Q9H3V2 200 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 DYNLRB1Q9NP97 96 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 GMPR2Q9P2T1 348 aaKnown RBP9.29□□□□□ -0.92
SEC13-214ENST00000476597 REV1Q9UBZ9 1251 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 SLC7A8Q9UHI5 535 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 CDC42EP3Q9UKI2 254 aa9.29□□□□□ -0.92
SEC13-214ENST00000476597 RTTNQ86VV8 2226 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 LOC100289279A0A1B0GTE1 492 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 SLC22A23A1A5C7 686 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 MCIDASD6RGH6 385 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 CCDC22O60826 627 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 MMP7P09237 267 aaPredicted RBP9.28□□□□□ -0.92
SEC13-214ENST00000476597 TACSTD2P09758 323 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 FAM157CP0CG43 387 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 ZNF16P17020 682 aaPredicted RBP9.28□□□□□ -0.92
SEC13-214ENST00000476597 FUT4P22083 530 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 IFNA8P32881 189 aa9.28□□□□□ -0.92
SEC13-214ENST00000476597 LSP1P33241 339 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms