RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 RNF185Q96GF1 192 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 DNTTIP1Q9H147 329 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 CLMPQ9H6B4 373 aa3.93□□□□□ -1.78
VPS50-212ENST00000476413 GEMIN7Q9H840 131 aaKnown RBP3.93□□□□□ -1.78
VPS50-212ENST00000476413 MTCL1Q9Y4B5 1905 aaKnown RBP3.92□□□□□ -1.78
VPS50-212ENST00000476413 EEDO75530 441 aaKnown RBP3.92□□□□□ -1.78
VPS50-212ENST00000476413 H6PDO95479 791 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 FGF4P08620 206 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 HPGDP15428 266 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 ZNF24P17028 368 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 SYKP43405 635 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 TNNT2P45379 298 aaPredicted RBP3.92□□□□□ -1.78
VPS50-212ENST00000476413 NCBP2P52298 156 aaKnown RBP eCLIP3.92□□□□□ -1.78
VPS50-212ENST00000476413 YWHAGP61981 247 aaKnown RBP eCLIP3.92□□□□□ -1.78
VPS50-212ENST00000476413 RPS21P63220 83 aaKnown RBP3.92□□□□□ -1.78
VPS50-212ENST00000476413 ANKRD26P1Q6NSI1 321 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 CERS6Q6ZMG9 384 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 SCD5Q86SK9 330 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 KRTAP11-1Q8IUC1 163 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 EID2Q8N6I1 236 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 RHEBL1Q8TAI7 183 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 MCUR1Q96AQ8 359 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 SLCO1B3Q9NPD5 702 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 GNPTGQ9UJJ9 305 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 ING4Q9UNL4 249 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 TMED5Q9Y3A6 229 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 HEBP2Q9Y5Z4 205 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 CACNG2Q9Y698 323 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 ARHGAP21Q5T5U3 1957 aa3.92□□□□□ -1.78
VPS50-212ENST00000476413 SMCO3A2RU48 225 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 PINLYPA6NC86 204 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 SPECC1L-ADORA2AF8WAN1 911 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 H0Y9J4 135 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 CLIC3O95833 236 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 C6orf47O95873 294 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 IGLV2-23P01705 113 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 CCNCP24863 283 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 RPS10P46783 165 aaKnown RBP3.91□□□□□ -1.78
VPS50-212ENST00000476413 ACTA2P62736 377 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 ACTG2P63267 376 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 ACTC1P68032 377 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 ACTA1P68133 377 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 PAX5Q02548 391 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 SELENBP1Q13228 472 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 RSPO1Q2MKA7 263 aaPredicted RBP3.91□□□□□ -1.78
VPS50-212ENST00000476413 RFX4Q33E94 735 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 SOHLH1Q5JUK2 328 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 SPECC1LQ69YQ0 1117 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 BZW1Q7L1Q6 419 aaKnown RBP3.91□□□□□ -1.78
VPS50-212ENST00000476413 SH2D6Q7Z4S9 175 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 BIVMQ86UB2 503 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 ZNF433Q8N7K0 673 aaPredicted RBP3.91□□□□□ -1.78
VPS50-212ENST00000476413 OR10R2Q8NGX6 335 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 OR6X1Q8NH79 312 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 DTX3LQ8TDB6 740 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 BLOC1S5Q8TDH9 187 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 PKNOX2Q96KN3 472 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 C20orf24Q9BUV8 137 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 OSBPL10Q9BXB5 764 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 GABARAPL3Q9BY60 117 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 EXO5Q9H790 373 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 CTPS2Q9NRF8 586 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 RABL2AQ9UBK7 228 aaPredicted RBP3.91□□□□□ -1.78
VPS50-212ENST00000476413 KIAA1257Q9ULG3 409 aa3.91□□□□□ -1.78
VPS50-212ENST00000476413 COL16A1Q07092 1604 aaPredicted RBP3.91□□□□□ -1.78
VPS50-212ENST00000476413 WDR62O43379 1518 aa3.9□□□□□ -1.78
VPS50-212ENST00000476413 INSRP06213 1382 aa3.9□□□□□ -1.78
VPS50-212ENST00000476413 AKNAQ7Z591 1439 aa3.9□□□□□ -1.78
VPS50-212ENST00000476413 PDS5BQ9NTI5 1447 aa3.9□□□□□ -1.78
VPS50-212ENST00000476413 A0A1B0GUA9 196 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 UTS2O95399 124 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 ZNF30P17039 623 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 SERPINB5P36952 375 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 C21orf59P57076 290 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 RAB10P61026 200 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 TMEM255AQ5JRV8 349 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 C1orf185Q5T7R7 199 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 C9orf135Q5VTT2 229 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 CCDC73Q6ZRK6 1079 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 OFCC1Q8IZS5 231 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 LIX1Q8N485 282 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 Q8N7P7 452 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 FAM81AQ8TBF8 368 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 MCOLN3Q8TDD5 553 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 CXorf40AQ8TE69 158 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 TMEM158Q8WZ71 300 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 SH3GL3Q99963 347 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 DMAP1Q9NPF5 467 aaPredicted RBP3.9□□□□□ -1.79
VPS50-212ENST00000476413 GPATCH2LQ9NWQ4 482 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 GCNT4Q9P109 453 aa3.9□□□□□ -1.79
VPS50-212ENST00000476413 IGHV3-64DA0A0J9YX35 117 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 A6NDX4 124 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 LRRIQ3A6PVS8 624 aaPredicted RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 F6UB75 175 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 H3BNH8 94 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 CDC7O00311 574 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 DYNC1I1O14576 645 aa3.89□□□□□ -1.79
VPS50-212ENST00000476413 LSM1O15116 133 aaKnown RBP3.89□□□□□ -1.79
VPS50-212ENST00000476413 SUPT3HO75486 399 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms