RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 UPK3AO75631 287 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 CD1AP06126 327 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 LIFP15018 202 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 CFL1P23528 166 aaKnown RBP16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 AZGP1P25311 298 aaKnown RBP16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 CRABP1P29762 137 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 BLVRAP53004 296 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 OR10A3P58181 314 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 PPP3R1P63098 170 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 CHAF1BQ13112 559 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 PAMR1Q6UXH9 720 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 LRRC69Q6ZNQ3 347 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 OR8H2Q8N162 312 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 OTOSQ8NHW6 89 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 RNF166Q96A37 237 aaPredicted RBP16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 OR14A2Q96R54 314 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 MRPL22Q9NWU5 206 aaKnown RBP16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 COA3Q9Y2R0 106 aaPredicted RBP16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 PCDHGA1Q9Y5H4 931 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 A0A087WZY1 265 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 FABP12A6NFH5 140 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 GPRIN2O60269 458 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 ADAM8P78325 824 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 FMODQ06828 376 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 EGR3Q06889 387 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 MADCAM1Q13477 382 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 TRIP6Q15654 476 aaKnown RBP16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 ZNF79Q15937 498 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 POC5Q8NA72 575 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 SLC25A43Q8WUT9 341 aaPredicted RBP16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 AMELYQ99218 206 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 CCDC32Q9BV29 185 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 EMC6Q9BV81 110 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 CACNA1HO95180 2353 aa16.41■□□□□ 0.22
SEC61A2-213ENST00000475268 NPIPB13A6NJU9 1138 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 NPIPB4C9JG80 1138 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 ZFPL1O95159 310 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 ABHD16AO95870 558 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 SERPINA7P05543 415 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 SPARCP09486 303 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 BIDP55957 195 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 GLO1Q04760 184 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 MEP1BQ16820 701 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 MZT2AQ6P582 158 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 TPRA1Q86W33 373 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 GTPBP8Q8N3Z3 284 aaPredicted RBP16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 TEX19Q8NA77 164 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 SGCZQ96LD1 299 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 B3GAT1Q9P2W7 334 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 TRAPPC4Q9Y296 219 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 ZNF281Q9Y2X9 895 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 A0A087WV48 116 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 A0A1W2PNV4 684 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 PHYHO14832 338 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 TNFSF15O95150 251 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 DSCR4P56555 118 aaPredicted RBP16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 ACER2Q5QJU3 275 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 RAET1LQ5VY80 246 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 TIGD3Q6B0B8 471 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 HBMQ6B0K9 141 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 GPAT4Q86UL3 456 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 MINDY2Q8NBR6 621 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 RPS4Y2Q8TD47 263 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 NSMAFQ92636 917 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 KCNK17Q96T54 332 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 GPR87Q9BY21 358 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 SLCO1C1Q9NYB5 712 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 DKKL1Q9UK85 242 aa16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 MRPS18BQ9Y676 258 aaKnown RBP16.4■□□□□ 0.22
SEC61A2-213ENST00000475268 GATBO75879 557 aaKnown RBP16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 ARL6IP5O75915 188 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 MPZL1O95297 269 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 FKBP2P26885 142 aaKnown RBP16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 FAM205BPQ63HN1 556 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 SFXN4Q6P4A7 337 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 DNM1P34Q6PK57 102 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 UEVLDQ8IX04 471 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 SRRQ9GZT4 340 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 FANCFQ9NPI8 374 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 TIGARQ9NQ88 270 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 TBCCD1Q9NVR7 557 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 FRRS1LQ9P0K9 344 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 HDGFL3Q9Y3E1 203 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 PCSK5Q92824 1860 aa16.39■□□□□ 0.21
SEC61A2-213ENST00000475268 ANKRD33BA6NCL7 494 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 C21orf140B9A014 251 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 P04436 131 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 DNASE1L1P49184 302 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 ALKBH1Q13686 389 aaKnown RBP16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 TMEM225Q6GV28 225 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 SLC18B1Q6NT16 456 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 H3F3CQ6NXT2 135 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 LRRN1Q6UXK5 716 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 SYT9Q86SS6 491 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 ACOT12Q8WYK0 555 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 NTNG2Q96CW9 530 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 PARD6AQ9NPB6 346 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 A0A1B0GTH9 108 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 ZNF814B7Z6K7 855 aa16.38■□□□□ 0.21
SEC61A2-213ENST00000475268 SULT2B1O00204 365 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms