RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 CCDC134Q9H6E4 229 aa12.12□□□□□ -0.47
DNMT3A-211ENST00000474887 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
DNMT3A-211ENST00000474887 TMEM38BQ9NVV0 291 aa12.12□□□□□ -0.47
DNMT3A-211ENST00000474887 RIMS3Q9UJD0 308 aa12.12□□□□□ -0.47
DNMT3A-211ENST00000474887 ZNF346Q9UL40 294 aaKnown RBP12.12□□□□□ -0.47
DNMT3A-211ENST00000474887 DNHD1Q96M86 4753 aa12.12□□□□□ -0.47
DNMT3A-211ENST00000474887 RTTNQ86VV8 2226 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 ZNF503-AS2A6NEH8 195 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 FAM220BPB1ANY3 271 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 BLOC1S5-TXNDC5H3BN57 136 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 STAMBPO95630 424 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 TSPAN19P0C672 248 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 PGA4P0DJD7 388 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 PGA3P0DJD8 388 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 APEHP13798 732 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 HNF1AP20823 631 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 KDELR2P33947 212 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 GIPRP48546 466 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 PTDSS1P48651 473 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 CHN2P52757 468 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 CRYBA2P53672 197 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 SELENOWP63302 87 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 PLP2Q04941 152 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 PIGFQ07326 219 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 ST3GAL3Q11203 375 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 FXNQ16595 210 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 RABL3Q5HYI8 236 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 UNQ6126/PRO20091Q6UXV3 157 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 SKA3Q8IX90 412 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 SVOPLQ8N434 492 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 RP9Q8TA86 221 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 TMEM239Q8WW34 195 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 TMEM158Q8WZ71 300 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 SGTBQ96EQ0 304 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 MDFIQ99750 246 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 MRPL13Q9BYD1 178 aaKnown RBP12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 SHARPINQ9H0F6 387 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 KCNN2Q9H2S1 579 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 SEC61A2Q9H9S3 476 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 MEPEQ9NQ76 525 aaPredicted RBP12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 FGFR1OP2Q9NVK5 253 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 KCNS2Q9ULS6 477 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 MED31Q9Y3C7 131 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 CAPN7Q9Y6W3 813 aa12.11□□□□□ -0.47
DNMT3A-211ENST00000474887 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 M0R233 179 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 SERPINI2O75830 405 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 SASH3O75995 380 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 SEC14L2O76054 403 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 OR7A10O76100 309 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 LY6HO94772 140 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 SNAP29O95721 258 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 QDPRP09417 244 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 TACSTD2P09758 323 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 PCMT1P22061 227 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 RAD52P43351 418 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 CLRN1P58418 232 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 GGTLC2Q14390 218 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 CYBRD1Q53TN4 286 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 HSP90B2PQ58FF3 399 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 MYPOPQ86VE0 399 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 LRRC17Q8N6Y2 441 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 ANKS4BQ8N8V4 417 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 OR2T12Q8NG77 320 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 HOPXQ9BPY8 73 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 SIAEQ9HAT2 523 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 ZNF224Q9NZL3 707 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 REV1Q9UBZ9 1251 aa12.1□□□□□ -0.47
DNMT3A-211ENST00000474887 LOC100653049A0A140TA62 436 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 IQCMA0A1B0GVH7 501 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 ELOVL7A1L3X0 281 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 MCIDASD6RGH6 385 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 KPNA4O00629 521 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 CCDC22O60826 627 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 KRT34O76011 436 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 ADRA2AP08913 450 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 ACADSP16219 412 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 UGT2B15P54855 530 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 TMEM33P57088 247 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 RPL18Q07020 188 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 CARTPTQ16568 116 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 C10orf128Q5T292 105 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 FAM205BPQ63HN1 556 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 SLC16A14Q7RTX9 510 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 TSPYL5Q86VY4 417 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 LSRQ86X29 649 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 MICU2Q8IYU8 434 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 RNF113BQ8IZP6 322 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 MCHR2Q969V1 340 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 WACQ9BTA9 647 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 BCL2L14Q9BZR8 327 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 MED4Q9NPJ6 270 aa12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 ANK3Q12955 4377 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-211ENST00000474887 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.48
DNMT3A-211ENST00000474887 MT-ND5P03915 603 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms