RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 HIST1H2ACQ93077 130 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 MRPL24Q96A35 216 aaKnown RBP15.99■□□□□ 0.15
COL7A1-209ENST00000474432 NMD3Q96D46 503 aaKnown RBP15.99■□□□□ 0.15
COL7A1-209ENST00000474432 ZNF347Q96SE7 839 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 SH3GL3Q99963 347 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 PIMREGQ9BSJ6 248 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 SOX7Q9BT81 388 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 RAB1BQ9H0U4 201 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 MYOZ1Q9NP98 299 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-209ENST00000474432 TMEM160Q9NX00 188 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 A4GNTQ9UNA3 340 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 CMAHPQ9Y471 501 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 CAPN7Q9Y6W3 813 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 SVEP1Q4LDE5 3571 aa15.99■□□□□ 0.15
COL7A1-209ENST00000474432 SH3PXD2BA1X283 911 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 SLC22A2O15244 555 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 UBL3O95164 117 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 BCL10O95999 233 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 SERPINA5P05154 406 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 GIFP27352 417 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 EVX1P49640 407 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 ARMC4Q5T2S8 1044 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 C8orf82Q6P1X6 216 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-209ENST00000474432 LRP11Q86VZ4 500 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 SLC15A3Q8IY34 581 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 PAQR4Q8N4S7 273 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-209ENST00000474432 PCYOX1LQ8NBM8 494 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 OR2T12Q8NG77 320 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 NEU4Q8WWR8 484 aaPredicted RBP15.98■□□□□ 0.15
COL7A1-209ENST00000474432 MCHR2Q969V1 340 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 SGTBQ96EQ0 304 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 BPESC1Q9GZL8 116 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 GID8Q9NWU2 228 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 SNX13Q9Y5W8 968 aa15.98■□□□□ 0.15
COL7A1-209ENST00000474432 PIP5K1CO60331 668 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 TRMUO75648 421 aaKnown RBP15.97■□□□□ 0.15
COL7A1-209ENST00000474432 ADRA2AP08913 450 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 OR8G3PP0DMU2 310 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 THRBP10828 461 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 DAOP14920 347 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 SELENOWP63302 87 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 MYBPC1Q00872 1141 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 LAPTM4AQ15012 233 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 CARTPTQ16568 116 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 CHRFAM7AQ494W8 412 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 LRRC23Q53EV4 343 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-209ENST00000474432 ARIH2OSQ8N7S6 290 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 NOXO1Q8NFA2 376 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 OR4K5Q8NGD3 323 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 MSI2Q96DH6 328 aaKnown RBP15.97■□□□□ 0.15
COL7A1-209ENST00000474432 MAN2C1Q9NTJ4 1040 aa15.97■□□□□ 0.15
COL7A1-209ENST00000474432 MYEF2Q9P2K5 600 aaKnown RBP15.97■□□□□ 0.15
COL7A1-209ENST00000474432 FBXO9Q9UK97 447 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-209ENST00000474432 IGKV1D-43A0A0B4J1Z2 117 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 ELOVL7A1L3X0 281 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 VSTM5A8MXK1 200 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 FFAR1O14842 300 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 RAB36O95755 333 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 IFNA14P01570 189 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 IGHG1P01857 330 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 MMP7P09237 267 aaPredicted RBP15.96■□□□□ 0.15
COL7A1-209ENST00000474432 ACADSP16219 412 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 ZNF23P17027 643 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 FHL1Q13642 323 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 CXXC5Q7LFL8 322 aaKnown RBP15.96■□□□□ 0.15
COL7A1-209ENST00000474432 VTCN1Q7Z7D3 282 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 TREML1Q86YW5 311 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 ZNF786Q8N393 782 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 SYT14Q8NB59 555 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 RP9Q8TA86 221 aaKnown RBP15.96■□□□□ 0.15
COL7A1-209ENST00000474432 TPD52L3Q96J77 140 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 KCNK17Q96T54 332 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 INIPQ9NRY2 104 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 UGT2A1Q9Y4X1 527 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 STAB1Q9NY15 2570 aa15.96■□□□□ 0.15
COL7A1-209ENST00000474432 CENPBD1B2RD01 187 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 LYNX1G3V0Z9 82 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 NME4O00746 187 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 LILRA1O75019 489 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 TACSTD2P09758 323 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 LYNX1P0DP58 116 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 COX4I1P13073 169 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 IGFBP5P24593 272 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 MDH1P40925 334 aaKnown RBP15.95■□□□□ 0.14
COL7A1-209ENST00000474432 GZMKP49863 264 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 SEC24CP53992 1094 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 RIN1Q13671 783 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 NRN1LQ496H8 165 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 C10orf128Q5T292 105 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 TSEN54Q7Z6J9 526 aaKnown RBP15.95■□□□□ 0.14
COL7A1-209ENST00000474432 LRRC75AQ8NAA5 344 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 HDAC2Q92769 488 aaKnown RBP15.95■□□□□ 0.14
COL7A1-209ENST00000474432 PRRC1Q96M27 445 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 SYT3Q9BQG1 590 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 TPK1Q9H3S4 243 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 DYNLRB1Q9NP97 96 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 FBXL3Q9UKT7 428 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 FZR1Q9UM11 496 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 HIF3AQ9Y2N7 669 aa15.95■□□□□ 0.14
COL7A1-209ENST00000474432 MED31Q9Y3C7 131 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms